IBBR Publications

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Li Y, Svehla K, Louder MK, Wycuff D, Phogat S, Tang M, Migueles SA, Wu X, Phogat A, Shaw GM, et al. Analysis of neutralization specificities in polyclonal sera derived from human immunodeficiency virus type 1-infected individuals. J Virol. 2009 ;83(2):1045-59.
Tung M, D Gallagher T. The Biomolecular Crystallization Database Version 4: expanded content and new features. Acta Crystallogr D Biol Crystallogr. 2009 ;65(Pt 1):18-23.
Scheid JF, Mouquet H, Feldhahn N, Seaman MS, Velinzon K, Pietzsch J, Ott RG, Anthony RM, Zebroski H, Hurley A, et al. Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals. Nature. 2009 ;458(7238):636-40.
Brodie A, Njar VCO, Macedo LFurtado, T Vasaitis S, Sabnis G. The Coffey Lecture: steroidogenic enzyme inhibitors and hormone dependent cancer. Urol Oncol. 2009 ;27(1):53-63.
Mast N, Liao W-L, Pikuleva IA, Turko IV. Combined use of mass spectrometry and heterologous expression for identification of membrane-interacting peptides in cytochrome P450 46A1 and NADPH-cytochrome P450 oxidoreductase. Arch Biochem Biophys. 2009 ;483(1):81-9.
Michino M, Abola E, Brooks CL, J Dixon S, Moult J, Stevens RC. Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008. Nat Rev Drug Discov. 2009 ;8(6):455-63.
Guvench O, Mackerell AD. Computational evaluation of protein-small molecule binding. Curr Opin Struct Biol. 2009 ;19(1):56-61.
K Clark R, Walsh STR. Crystal structure of a 3B3 variant--a broadly neutralizing HIV-1 scFv antibody. Protein Sci. 2009 ;18(12):2429-41.
Y Yu B. Delivered dose: a drug-centric phenotype for chemotherapy dose individualization. Pharm Res. 2009 ;26(8):1803-6.
Burkhard K, Smith S, Deshmukh R, Mackerell AD, Shapiro P. Development of extracellular signal-regulated kinase inhibitors. Curr Top Med Chem. 2009 ;9(8):678-89.
Joseph KS, Moser AC, Basiaga SBG, Schiel JE, Hage DS. Evaluation of alternatives to warfarin as probes for Sudlow site I of human serum albumin: characterization by high-performance affinity chromatography. J Chromatogr A. 2009 ;1216(16):3492-500.
Cozzetto D, Kryshtafovych A, Fidelis K, Moult J, Rost B, Tramontano A. Evaluation of template-based models in CASP8 with standard measures. Proteins. 2009 ;77 Suppl 9:18-28.
Hister CAL, Laughinghouse HDail, Da Silva CB, Dorow TSDo C, Tedesco SB. Evaluation of the antiproliferative effect of infusions and essential oil of Aloysia gratissima. Pak J Biol Sci. 2009 ;12(24):1581-4.
Calderon AJ, Muzykantov V, Muro S, Eckmann DM. Flow dynamics, binding and detachment of spherical carriers targeted to ICAM-1 on endothelial cells. Biorheology. 2009 ;46(4):323-41.
Carmel R, Parker J, Kelman Z. Genomic mutations associated with mild and severe deficiencies of transcobalamin I (haptocorrin) that cause mildly and severely low serum cobalamin levels. Br J Haematol. 2009 ;147(3):386-91.
González PM, Acharya C, Mackerell AD, Polli JE. Inhibition requirements of the human apical sodium-dependent bile acid transporter (hASBT) using aminopiperidine conjugates of glutamyl-bile acids. Pharm Res. 2009 ;26(7):1665-78.
Schiel JE, Ohnmacht CM, Hage DS. Measurement of drug-protein dissociation rates by high-performance affinity chromatography and peak profiling. Anal Chem. 2009 ;81(11):4320-33.
Prausnitz MR, Mikszta JA, Cormier M, Andrianov AK. Microneedle-based vaccines. Curr Top Microbiol Immunol. 2009 ;333:369-93.
Alexander PA, He Y, Chen Y, Orban J, Bryan PN. A minimal sequence code for switching protein structure and function. Proc Natl Acad Sci U S A. 2009 ;106(50):21149-54.
Yin Y, Mariuzza RA. The multiple mechanisms of T cell receptor cross-reactivity. Immunity. 2009 ;31(6):849-51.
Merkle JA, Rickmyre JL, Garg A, Loggins EB, Jodoin JN, Lee E, Wu LP, Lee LA. no poles encodes a predicted E3 ubiquitin ligase required for early embryonic development of Drosophila. Development. 2009 ;136(3):449-59.
Chen J, Schiel JE, Hage DS. Noncompetitive peak decay analysis of drug-protein dissociation by high-performance affinity chromatography. J Sep Sci. 2009 ;32(10):1632-41.
Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, et al. Outcome of a workshop on applications of protein models in biomedical research. Structure. 2009 ;17(2):151-9.
Meuse CW, Barker PE. Quantitative infrared spectroscopy of formalin-fixed, paraffin-embedded tissue specimens: paraffin wax removal with organic solvents. Appl Immunohistochem Mol Morphol. 2009 ;17(6):547-52.
Byrd CM, Bentley WE. Quieting cross talk--the quorum sensing regulator LsrR as a possible target for fighting bacterial infections. Cell Res. 2009 ;19(11):1229-30.