Publications

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Computational Modeling of Hepatitis C Virus Envelope Glycoprotein Structure and Recognition.
Guest JD, Pierce BG. 2018. Computational Modeling of Hepatitis C Virus Envelope Glycoprotein Structure and Recognition. Frontiers in immunology 9: 1117. DOI: 10.3389/fimmu.2018.01117
Discovery and Biochemical Characterization of PlyP56, PlyN74, and PlyTB40-Bacillus Specific Endolysins.
Etobayeva I, Linden SB, Alem F, Harb L, Rizkalla L, Mosier PD, Johnson AA, Temple L, Hakami RM, Nelson DC. 2018. Discovery and Biochemical Characterization of PlyP56, PlyN74, and PlyTB40-<i>Bacillus</i> Specific Endolysins. Viruses 10(5): . DOI: 10.3390/v10050276
Fabrication of Tobacco Mosaic Virus-Like Nanorods for Peptide Display.
Larkin EJ, Brown AD, Culver JN. 2018. Fabrication of Tobacco Mosaic Virus-Like Nanorods for Peptide Display. Methods in molecular biology (Clifton, N.J.) 1776: 51-60. DOI: 10.1007/978-1-4939-7808-3_4
Evidence of link between quorum sensing and sugar metabolism in Escherichia coli revealed via cocrystal structures of LsrK and HPr.
Ha JH, Hauk P, Cho K, Eo Y, Ma X, Stephens K, Cha S, Jeong M, Suh JY, Sintim HO, et al. 2018. Evidence of link between quorum sensing and sugar metabolism in <i>Escherichia coli</i> revealed via cocrystal structures of LsrK and HPr. Science advances 4(6): eaar7063. DOI: 10.1126/sciadv.aar7063
Catechol-chitosan redox capacitor for added amplification in electrochemical immunoanalysis.
Yan K, Liu Y, Guan Y, Bhokisham N, Tsao CY, Kim E, Shi XW, Wang Q, Bentley WE, Payne GF. 2018. Catechol-chitosan redox capacitor for added amplification in electrochemical immunoanalysis. Colloids and surfaces. B, Biointerfaces 169: 470-477. DOI: 10.1016/j.colsurfb.2018.05.048
Water proton NMR detection of amide hydrolysis and diglycine dimerization.
Briggs KT, Taraban MB, Yu YB. 2018. Water proton NMR detection of amide hydrolysis and diglycine dimerization. Chemical communications (Cambridge, England) 54(51): 7003-7006. DOI: 10.1039/c8cc03935f
Focusing quorum sensing signalling by nano-magnetic assembly.
Guan Y, Tsao CY, Quan DN, Li Y, Mei L, Song Y, Zhang B, Liu Y, Payne GF, Bentley WE, et al. 2018. Focusing quorum sensing signalling by nano-magnetic assembly. Environmental microbiology 20(7): 2585-2597. DOI: 10.1111/1462-2920.14284
Electrodeposition of a magnetic and redox-active chitosan film for capturing and sensing metabolic active bacteria.
Li Y, Liu Y, Kim E, Song Y, Tsao CY, Teng Z, Gao T, Mei L, Bentley WE, Payne GF, et al. 2018. Electrodeposition of a magnetic and redox-active chitosan film for capturing and sensing metabolic active bacteria. Carbohydrate polymers 195: 505-514. DOI: 10.1016/j.carbpol.2018.04.096
TCRmodel: high resolution modeling of T cell receptors from sequence.
Gowthaman R, Pierce BG. 2018. TCRmodel: high resolution modeling of T cell receptors from sequence. Nucleic acids research 46(W1): W396-W401. DOI: 10.1093/nar/gky432
PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer.
Lin X, Roy S, Jolly MK, Bocci F, Schafer NP, Tsai MY, Chen Y, He Y, Grishaev A, Weninger K, et al. 2018. PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer. Journal of molecular biology 430(16): 2422-2438. DOI: 10.1016/j.jmb.2018.05.011
Borrelia burgdorferi surface-located Lmp1 protein processed into region-specific polypeptides that are critical for microbial persistence.
Zhuang X, Yang X, Altieri AS, Nelson DC, Pal U. 2018. Borrelia burgdorferi surface-located Lmp1 protein processed into region-specific polypeptides that are critical for microbial persistence. Cellular microbiology 20(9): e12855. DOI: 10.1111/cmi.12855
Engineering bacterial motility towards hydrogen-peroxide.
Virgile C, Hauk P, Wu HC, Shang W, Tsao CY, Payne GF, Bentley WE. 2018. Engineering bacterial motility towards hydrogen-peroxide. PloS one 13(5): e0196999. DOI: 10.1371/journal.pone.0196999
Biofabricating Functional Soft Matter Using Protein Engineering to Enable Enzymatic Assembly.
Liu Y, Wu HC, Bhokisham N, Li J, Hong KL, Quan DN, Tsao CY, Bentley WE, Payne GF. 2018. Biofabricating Functional Soft Matter Using Protein Engineering to Enable Enzymatic Assembly. Bioconjugate chemistry 29(6): 1809-1822. DOI: 10.1021/acs.bioconjchem.8b00197
Short communication: Recombinant bacteriophage endolysin PlyC is nontoxic and does not alter blood neutrophil oxidative response in lactating dairy cows.
Scholte CM, Nelson DC, Garcia M, Linden SB, Elsasser TH, Kahl S, Qu Y, Moyes KM. 2018. Short communication: Recombinant bacteriophage endolysin PlyC is nontoxic and does not alter blood neutrophil oxidative response in lactating dairy cows. Journal of dairy science 101(7): 6419-6423. DOI: 10.3168/jds.2017-13908
Automated Removal of Phospholipids from Membrane Proteins for H/D Exchange Mass Spectrometry Workflows.
Anderson KW, Gallagher ES, Hudgens JW. 2018. Automated Removal of Phospholipids from Membrane Proteins for H/D Exchange Mass Spectrometry Workflows. Analytical chemistry 90(11): 6409-6412. DOI: 10.1021/acs.analchem.8b00429