IBBR Publications

Found 2848 results
2020
Conlon IL, Drennen B, Lanning ME, Hughes S, Rothhaas R, Wilder PT, Mackerell AD, Fletcher S. Rationally Designed Polypharmacology: α-Helix Mimetics as Dual Inhibitors of the Oncoproteins Mcl-1 and HDM2. ChemMedChem. 2020 .
Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE. A redox-based electrogenetic CRISPR system to connect with and control biological information networks. Nat Commun. 2020 ;11(1):2427.
Song J, Liu H, Lei M, Tan H, Chen Z, Antoshin A, Payne GF, Qu X, Liu C. Redox-Channeling Polydopamine-Ferrocene (PDA-Fc) Coating To Confer Context-Dependent and Photothermal Antimicrobial Activities. ACS Appl Mater Interfaces. 2020 .
Nichols PJ, Born A, Henen MA, Strotz D, Jones DN, Delaglio F, Vögeli B. Reducing the measurement time of exact NOEs by non-uniform sampling. J Biomol NMR. 2020 .
Zhao Z-X, Feng Q, Liu P-Q, He X-R, Zhao J-H, Xu Y-J, Zhang L-L, Huang Y-Y, Zhao J-Q, Fan J, et al. RPW8.1 enhances the ethylene-signaling pathway to feedback-attenuate its mediated cell death and disease resistance in Arabidopsis. New Phytol. 2020 .
Rupakheti C, Lamoureux G, Mackerell AD, Roux B. Statistical mechanics of polarizable force fields based on classical Drude oscillators with dynamical propagation by the dual-thermostat extended Lagrangian. J Chem Phys. 2020 ;153(11):114108.
Wu D, D Gallagher T, Gowthaman R, Pierce BG, Mariuzza RA. Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen. Nat Commun. 2020 ;11(1):2908.
Greenfield J, Shang X, Luo H, Zhou Y, Linden SB, Heselpoth RD, Leiman PG, Nelson DC, Herzberg O. Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7. Sci Rep. 2020 ;10(1):15402.
Xu X, Godoy-Ruiz R, Adipietro KA, Peralta C, Ben-Hail D, Varney KM, Cook ME, Roth BM, Wilder PT, Cleveland T, et al. Structure of the cell-binding component of the binary toxin reveals a di-heptamer macromolecular assembly. Proc Natl Acad Sci U S A. 2020 .
Pierce BG, Keck Z-Y, Wang R, Lau P, Garagusi K, Elkholy K, Toth EA, Urbanowicz RA, Guest JD, Agnihotri P, et al. Structure-based design of hepatitis C virus E2 glycoprotein improves serum binding and cross-neutralization. J Virol. 2020 .
Stephens K, Bentley WE. Synthetic Biology for Manipulating Quorum Sensing in Microbial Consortia. Trends Microbiol. 2020 .
Bhokisham N, Liu Y, Brown A, Payne GF, Culver JN, Bentley WE. Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2. Biofabrication. 2020 .
Kelman LM, O'Dell WB, Kelman Z. Unwinding twenty years of the archaeal minichromosome maintenance helicase. J Bacteriol. 2020 .
Kappagantu M, Collum TD, Dardick C, Culver JN. Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection. Annu Rev Virol. 2020 .
2019
Brinson RG, Marino JP. 2D J-correlated proton NMR experiments for structural fingerprinting of biotherapeutics. J Magn Reson. 2019 ;307:106581.
Urbanowicz RA, Wang R, Schiel JE, Keck Z-Y, Kerzic MC, Lau P, Rangarajan S, Garagusi KJ, Tan L, Guest JD, et al. Antigenicity and Immunogenicity of Differentially Glycosylated HCV E2 Envelope Proteins Expressed in Mammalian and Insect Cells. J Virol. 2019 .
Lei L, Tran K, Wang Y, Steinhardt JJ, Xiao Y, Chiang C-I, Wyatt RT, Li Y. Antigen-Specific Single B Cell Sorting and Monoclonal Antibody Cloning in Guinea Pigs. Front Microbiol. 2019 ;10:672.
Kasak L, Bakolitsa C, Hu Z, Yu C, Rine J, Dimster-Denk DF, Pandey G, De Baets G, Bromberg Y, Cao C, et al. Assessing Computational Predictions of the Phenotypic Effect of Cystathionine-beta-Synthase Variants. Hum Mutat. 2019 .
Nazario-Toole AE, Wu LP. Assessing the Cellular Immune Response of the Fruit Fly, Drosophila melanogaster, Using an In Vivo Phagocytosis Assay. J Vis Exp. 2019 ;(146).
Pejaver V, Babbi G, Casadio R, Folkman L, Katsonis P, Kundu K, Lichtarge O, Martelli PLuigi, Miller M, Moult J, et al. Assessment of methods for predicting the effects of PTEN and TPMT protein variants. Hum Mutat. 2019 .
Carraro M, Monzon AMiguel, Chiricosta L, Reggiani F, Aspromonte MCristina, Bellini M, Pagel K, Jiang Y, Radivojac P, Kundu K, et al. Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI-5 intellectual disability challenge. Hum Mutat. 2019 .
Clark WT, Kasak L, Bakolitsa C, Hu Z, Andreoletti G, Babbi G, Bromberg Y, Casadio R, Dunbrack R, Folkman L, et al. Assessment of predicted enzymatic activity of alpha-N-acetylglucosaminidase (NAGLU) variants of unknown significance for CAGI 2016. Hum Mutat. 2019 .
Ueda H, Stephens K, Trivisa K, Bentley WE. Bacteria Floc, but Do They Flock? Insights from Population Interaction Models of Quorum Sensing. MBio. 2019 ;10(3).
Stephens K, Pozo M, Tsao C-Y, Hauk P, Bentley WE. Bacterial co-culture with cell signaling translator and growth controller modules for autonomously regulated culture composition. Nat Commun. 2019 ;10(1):4129.
Keck Z-Y, Pierce BG, Lau P, Lu J, Wang Y, Underwood A, Bull RA, Prentoe J, Velázquez-Moctezuma R, Walker MR, et al. Broadly neutralizing antibodies from an individual that naturally cleared multiple hepatitis C virus infections uncover molecular determinants for E2 targeting and vaccine design. PLoS Pathog. 2019 ;15(5):e1007772.