IBBR Publications

Melville Z, Hernández-Ochoa EO, Pratt SJP, Liu Y, Pierce AD, Wilder PT, Adipietro KA, Breysse DH, Varney KM, Schneider MF, et al. The Activation of Protein Kinase A by the Calcium-Binding Protein S100A1 Is Independent of Cyclic AMP. Biochemistry. 2017 ;56(17):2328-2337.

Maiti A, Noon MS, Mackerell AD, Pozharski E, Drohat AC. Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNA. Proc Natl Acad Sci U S A. 2012 ;109(21):8091-6.

Barr D, Oashi T, Burkhard K, Lucius S, Samadani R, Zhang J, Shapiro P, Mackerell AD, van der Vaart A. Importance of domain closure for the autoactivation of ERK2. Biochemistry. 2011 ;50(37):8038-48.

Xu Z, Chen Y-W, Battu A, Wilder PT, Weber DJ, Yu W, Mackerell AD, Chen L-M, Chai KX, Johnson MD, et al. Targeting zymogen activation to control the matriptase-prostasin proteolytic cascade. J Med Chem. 2011 ;54(21):7567-78.

Lin J, Yang Q, Wilder PT, Carrier F, Weber DJ. The calcium-binding protein S100B down-regulates p53 and apoptosis in malignant melanoma. J Biol Chem. 2010 ;285(35):27487-98.

Haugland GTeien, Rollor CR, Birkeland N-K, Kelman Z. Biochemical characterization of the minichromosome maintenance protein from the archaeon Thermoplasma acidophilum. Extremophiles. 2009 ;13(1):81-8.

Lewandowski AT, Yi H, Luo X, Payne GF, Ghodssi R, Rubloff GW, Bentley WE. Protein assembly onto patterned microfabricated devices through enzymatic activation of fusion pro-tag. Biotechnol Bioeng. 2008 ;99(3):499-507.

Garnacho C, Shuvaev V, Thomas A, McKenna L, Sun J, Koval M, Albelda S, Muzykantov V, Muro S. RhoA activation and actin reorganization involved in endothelial CAM-mediated endocytosis of anti-PECAM carriers: critical role for tyrosine 686 in the cytoplasmic tail of PECAM-1. Blood. 2008 ;111(6):3024-33.

Hancock CN, Macias AT, Mackerell AD, Shapiro P. Mitogen activated protein (MAP) kinases: development of ATP and non-ATP dependent inhibitors. Med Chem. 2006 ;2(2):213-22.

Haugland GTeien, Shin J-H, Birkeland N-K, Kelman Z. Stimulation of MCM helicase activity by a Cdc6 protein in the archaeon Thermoplasma acidophilum. Nucleic Acids Res. 2006 ;34(21):6337-44.

Strausberg SL, Ruan B, Fisher KE, Alexander PA, Bryan PN. Directed coevolution of stability and catalytic activity in calcium-free subtilisin. Biochemistry. 2005 ;44(9):3272-9.

Tao Y, Bentley WE, Wood TK. Regiospecific oxidation of naphthalene and fluorene by toluene monooxygenases and engineered toluene 4-monooxygenases of Pseudomonas mendocina KR1. Biotechnol Bioeng. 2005 ;90(1):85-94.

Fishman A, Tao Y, Bentley WE, Wood TK. Protein engineering of toluene 4-monooxygenase of Pseudomonas mendocina KR1 for synthesizing 4-nitrocatechol from nitrobenzene. Biotechnol Bioeng. 2004 ;87(6):779-90.

Sigman JA, Sharky ML, Walsh STR, Pabon A, Glucksman MJ, Wolfson AJ. Involvement of surface cysteines in activity and multimer formation of thimet oligopeptidase. Protein Eng. 2003 ;16(8):623-8.

Lehmann C, Lim K, Toedt J, Krajewski W, Howard A, Eisenstein E, Herzberg O. Structure of 2C-methyl-D-erythrol-2,4-cyclodiphosphate synthase from Haemophilus influenzae: activation by conformational transition. Proteins. 2002 ;49(1):135-8.

Turko IV, Marcondes S, Murad F. Diabetes-associated nitration of tyrosine and inactivation of succinyl-CoA:3-oxoacid CoA-transferase. Am J Physiol Heart Circ Physiol. 2001 ;281(6):H2289-94.

Li Y, Coutinho PM, Ford C. Effect on thermostability and catalytic activity of introducing disulfide bonds into Aspergillus awamori glucoamylase. Protein Eng. 1998 ;11(8):661-7.

Landar A, Rustandi RR, Weber DJ, Zimmer DB. S100A1 utilizes different mechanisms for interacting with calcium-dependent and calcium-independent target proteins. Biochemistry. 1998 ;37(50):17429-38.

DiRuggiero J, Robb FT, Jagus R, Klump HH, Borges KM, Kessel M, Mai X, Adams MW. Characterization, cloning, and in vitro expression of the extremely thermostable glutamate dehydrogenase from the hyperthermophilic Archaeon, ES4. J Biol Chem. 1993 ;268(24):17767-74.

Klump H, Di Ruggiero J, Kessel M, Park JB, Adams MW, Robb FT. Glutamate dehydrogenase from the hyperthermophile Pyrococcus furiosus. Thermal denaturation and activation. J Biol Chem. 1992 ;267(31):22681-5.

Zimmer DB, Van Eldik LJ. Identification of a molecular target for the calcium-modulated protein S100. Fructose-1,6-bisphosphate aldolase. J Biol Chem. 1986 ;261(24):11424-8.