IBBR Publications

Found 17 results
Filters: Keyword is DNA, Single-Stranded  [Clear All Filters]
2012
Ben-Yoav H, Dykstra PH, Bentley WE, Ghodssi R. A microfluidic-based electrochemical biochip for label-free diffusion-restricted DNA hybridization analysis. Biosens Bioelectron. 2012 ;38(1):114-20.
2011
Sakakibara N, Kasiviswanathan R, Kelman Z. Mutational analysis of conserved aspartic acid residues in the Methanothermobacter thermautotrophicus MCM helicase. Extremophiles. 2011 ;15(2):245-52.
Li Z, Pan M, Santangelo TJ, Chemnitz W, Yuan W, Edwards JL, Hurwitz J, Reeve JN, Kelman Z. A novel DNA nuclease is stimulated by association with the GINS complex. Nucleic Acids Res. 2011 ;39(14):6114-23.
2010
Sakakibara N, Kasiviswanathan R, Kelman Z. Different residues on the surface of the Methanothermobacter thermautotrophicus MCM helicase interact with single- and double-stranded DNA. Archaea. 2010 ;2010:505693.
2009
Dexheimer TS, Gediya LK, Stephen AG, Weidlich I, Antony S, Marchand C, Interthal H, Nicklaus M, Fisher RJ, Njar VCO, et al. 4-Pregnen-21-ol-3,20-dione-21-(4-bromobenzenesulfonate) (NSC 88915) and related novel steroid derivatives as tyrosyl-DNA phosphodiesterase (Tdp1) inhibitors. J Med Chem. 2009 ;52(22):7122-31.
Haugland GTeien, Rollor CR, Birkeland N-K, Kelman Z. Biochemical characterization of the minichromosome maintenance protein from the archaeon Thermoplasma acidophilum. Extremophiles. 2009 ;13(1):81-8.
Samuels M, Gulati G, Shin J-H, Opara R, McSweeney E, Sekedat M, Long S, Kelman Z, Jeruzalmi D. A biochemically active MCM-like helicase in Bacillus cereus. Nucleic Acids Res. 2009 ;37(13):4441-52.
Mackerell AD. Contribution of the intrinsic mechanical energy of the phosphodiester linkage to the relative stability of the A, BI, and BII forms of duplex DNA. J Phys Chem B. 2009 ;113(10):3235-44.
2006
Haugland GTeien, Shin J-H, Birkeland N-K, Kelman Z. Stimulation of MCM helicase activity by a Cdc6 protein in the archaeon Thermoplasma acidophilum. Nucleic Acids Res. 2006 ;34(21):6337-44.
2004
Kasiviswanathan R, Shin J-H, Melamud E, Kelman Z. Biochemical characterization of the Methanothermobacter thermautotrophicus minichromosome maintenance (MCM) helicase N-terminal domains. J Biol Chem. 2004 ;279(27):28358-66.
Gulbis JM, Kazmirski SL, Finkelstein J, Kelman Z, O'Donnell M, Kuriyan J. Crystal structure of the chi:psi sub-assembly of the Escherichia coli DNA polymerase clamp-loader complex. Eur J Biochem. 2004 ;271(2):439-49.
Yi H, Wu L-Q, Ghodssi R, Rubloff GW, Payne GF, Bentley WE. A robust technique for assembly of nucleic acid hybridization chips based on electrochemically templated chitosan. Anal Chem. 2004 ;76(2):365-72.
2003
Yi H, Wu L-Q, Sumner JJ, Gillespie JB, Payne GF, Bentley WE. Chitosan scaffolds for biomolecular assembly: coupling nucleic acid probes for detecting hybridization. Biotechnol Bioeng. 2003 ;83(6):646-52.
1999
Yuzhakov A, Kelman Z, Hurwitz J, O'Donnell M. Multiple competition reactions for RPA order the assembly of the DNA polymerase delta holoenzyme. EMBO J. 1999 ;18(21):6189-99.
Kelman Z, Lee JK, Hurwitz J. The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity. Proc Natl Acad Sci U S A. 1999 ;96(26):14783-8.
1998
Kelman Z, Yuzhakov A, Andjelkovic J, O'Donnell M. Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly. EMBO J. 1998 ;17(8):2436-49.
1992
Larson TG, Choi GH, Nuss DL. Regulatory pathways governing modulation of fungal gene expression by a virulence-attenuating mycovirus. EMBO J. 1992 ;11(12):4539-48.