IBBR Publications

Bhaduri S, Stadnytskyi V, Zakharov SD, S Hasan S, Bujnowicz Ł, Sarewicz M, Savikhin S, Osyczka A, Cramer WA. Pathways of Transmembrane Electron Transfer in Cytochrome bc Complexes: Dielectric Heterogeneity and Interheme Coulombic Interactions. J Phys Chem B. 2017 ;121(5):975-983.

Li Z, Huang RY-C, Yopp DC, Hileman TH, Santangelo TJ, Hurwitz J, Hudgens JW, Kelman Z. A novel mechanism for regulating the activity of proliferating cell nuclear antigen by a small protein. Nucleic Acids Res. 2014 ;42(9):5776-89.

Sabit H, Mallajosyula SS, Mackerell AD, Swaan PW. Transmembrane domain II of the human bile acid transporter SLC10A2 coordinates sodium translocation. J Biol Chem. 2013 ;288(45):32394-404.

Heo G-Y, Liao W-L, Turko IV, Pikuleva IA. Features of the retinal environment which affect the activities and product profile of cholesterol-metabolizing cytochromes P450 CYP27A1 and CYP11A1. Arch Biochem Biophys. 2012 ;518(2):119-26.

Maltsev AS, Grishaev A, Bax A. Monomeric α-synuclein binds Congo Red micelles in a disordered manner. Biochemistry. 2012 ;51(2):631-42.

Kurouski D, Luo H, Sereda V, Robb FT, Lednev IK. Rapid degradation kinetics of amyloid fibrils under mild conditions by an archaeal chaperonin. Biochem Biophys Res Commun. 2012 ;422(1):97-102.

S Hasan S, Cramer WA. On rate limitations of electron transfer in the photosynthetic cytochrome b6f complex. Phys Chem Chem Phys. 2012 ;14(40):13853-60.

Underwood KF, D'Souza DR, Mochin-Peters M, Pierce AD, Kommineni S, Choe M, Bennett J, Gnatt A, Habtemariam B, Mackerell AD, et al. Regulation of RUNX2 transcription factor-DNA interactions and cell proliferation by vitamin D3 (cholecalciferol) prohormone activity. J Bone Miner Res. 2012 ;27(4):913-25.

Walsh STR. Structural insights into the common γ-chain family of cytokines and receptors from the interleukin-7 pathway. Immunol Rev. 2012 ;250(1):303-16.

Bera AK, Atanasova V, Dhanda A, Ladner JE, Parsons JF. Structure of aminodeoxychorismate synthase from Stenotrophomonas maltophilia. Biochemistry. 2012 ;51(51):10208-17.

D Gallagher T, Kim S-K, Robinson H, Reddy PT. Active-site structure of class IV adenylyl cyclase and transphyletic mechanism. J Mol Biol. 2011 ;405(3):787-803.

Hendler RW, Meuse CW, Braiman MS, Smith PD, Kakareka JW. Infrared and visible absolute and difference spectra of bacteriorhodopsin photocycle intermediates. Appl Spectrosc. 2011 ;65(9):1029-45.

Walker ML, Vanderah DJ, Rubinson KA. In-situ characterization of self-assembled monolayers of water-soluble oligo(ethylene oxide) compounds. Colloids Surf B Biointerfaces. 2011 ;82(2):450-5.

Tong Z, Schiel JE, Papastavros E, Ohnmacht CM, Smith QR, Hage DS. Kinetic studies of drug-protein interactions by using peak profiling and high-performance affinity chromatography: examination of multi-site interactions of drugs with human serum albumin columns. J Chromatogr A. 2011 ;1218(15):2065-71.

Zucconi BE, Ballin JD, Brewer BY, Ross CR, Huang J, Toth EA, Wilson GM. Alternatively expressed domains of AU-rich element RNA-binding protein 1 (AUF1) regulate RNA-binding affinity, RNA-induced protein oligomerization, and the local conformation of bound RNA ligands. J Biol Chem. 2010 ;285(50):39127-39.

Schiel JE, Joseph KS, Hage DS. Biointeraction affinity chromatography: general principles and recent developments. Adv Chromatogr. 2010 ;48:145-93.

Pierce BG, Haidar JN, Yu Y, Weng Z. Combinations of affinity-enhancing mutations in a T cell receptor reveal highly nonadditive effects within and between complementarity determining regions and chains. Biochemistry. 2010 ;49(33):7050-9.

Decollibus DP, Marin A, Andrianov AK. Effect of environmental factors on hydrolytic degradation of water-soluble polyphosphazene polyelectrolyte in aqueous solutions. Biomacromolecules. 2010 ;11(8):2033-8.

Charpentier TH, Thompson LE, Liriano MA, Varney KM, Wilder PT, Pozharski E, Toth EA, Weber DJ. The effects of CapZ peptide (TRTK-12) binding to S100B-Ca2+ as examined by NMR and X-ray crystallography. J Mol Biol. 2010 ;396(5):1227-43.

Yoo MJ, Schiel JE, Hage DS. Evaluation of affinity microcolumns containing human serum albumin for rapid analysis of drug-protein binding. J Chromatogr B Analyt Technol Biomed Life Sci. 2010 ;878(20):1707-13.

Deng L, Velikovsky CA, Xu G, Iyer LM, Tasumi S, Kerzic MC, Flajnik MF, Aravind L, Pancer Z, Mariuzza RA. A structural basis for antigen recognition by the T cell-like lymphocytes of sea lamprey. Proc Natl Acad Sci U S A. 2010 ;107(30):13408-13.

Rais R, Acharya C, Mackerell AD, Polli JE. Structural determinants for transport across the intestinal bile acid transporter using C-24 bile acid conjugates. Mol Pharm. 2010 ;7(6):2240-54.

Wadington MC, Ladner JE, Stourman NV, Harp JM, Armstrong RN. Analysis of the structure and function of YfcG from Escherichia coli reveals an efficient and unique disulfide bond reductase. Biochemistry. 2009 ;48(28):6559-61.

Mast N, Liao W-L, Pikuleva IA, Turko IV. Combined use of mass spectrometry and heterologous expression for identification of membrane-interacting peptides in cytochrome P450 46A1 and NADPH-cytochrome P450 oxidoreductase. Arch Biochem Biophys. 2009 ;483(1):81-9.

Lee H-W, Briggs KT, Marino JP. Dissecting structural transitions in the HIV-1 dimerization initiation site RNA using 2-aminopurine fluorescence. Methods. 2009 ;49(2):118-27.