Publications

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Structural probing of the HIV-1 polypurine tract RNA:DNA hybrid using classic nucleic acid ligands.
Turner KB, Brinson RG, Yi-Brunozzi HY, Rausch JW, Miller JT, Le Grice SF, Marino JP, Fabris D. 2008. Structural probing of the HIV-1 polypurine tract RNA:DNA hybrid using classic nucleic acid ligands. Nucleic acids research 36(8): 2799-810. DOI: 10.1093/nar/gkn129
Chitosan fibers: versatile platform for nickel-mediated protein assembly.
Shi XW, Wu HC, Liu Y, Tsao CY, Wang K, Kobatake E, Bentley WE, Payne GF. 2008. Chitosan fibers: versatile platform for nickel-mediated protein assembly. Biomacromolecules 9(5): 1417-23. DOI: 10.1021/bm800072e
The Methanothermobacter thermautotrophicus Cdc6-2 protein, the putative helicase loader, dissociates the minichromosome maintenance helicase.
Shin JH, Heo GY, Kelman Z. 2008. The Methanothermobacter thermautotrophicus Cdc6-2 protein, the putative helicase loader, dissociates the minichromosome maintenance helicase. Journal of bacteriology 190(11): 4091-4. DOI: 10.1128/JB.00233-08
The Escherichia coli YdcF binds S-adenosyl-L-methionine and adopts an alpha/beta-fold characteristic of nucleotide-utilizing enzymes.
Chao KL, Lim K, Lehmann C, Doseeva V, Howard AJ, Schwarz FP, Herzberg O. 2008. The Escherichia coli YdcF binds S-adenosyl-L-methionine and adopts an alpha/beta-fold characteristic of nucleotide-utilizing enzymes. Proteins 72(1): 506-9. DOI: 10.1002/prot.22046
The oldest antibodies newly discovered.
Pancer Z, Mariuzza RA. 2008. The oldest antibodies newly discovered. Nature biotechnology 26(4): 402-3. DOI: 10.1038/nbt0408-402
Strategy combining separation of isotope-labeled unfolded proteins and matrix-assisted laser desorption/ionization mass spectrometry analysis enables quantification of a wide range of serum proteins.
Liao WL, Turko IV. 2008. Strategy combining separation of isotope-labeled unfolded proteins and matrix-assisted laser desorption/ionization mass spectrometry analysis enables quantification of a wide range of serum proteins. Analytical biochemistry 377(1): 55-61. DOI: 10.1016/j.ab.2008.03.016
High-resolution NMR analysis of the conformations of native and base analog substituted retroviral and LTR-retrotransposon PPT primers.
Yi-Brunozzi HY, Brinson RG, Brabazon DM, Lener D, Le Grice SF, Marino JP. 2008. High-resolution NMR analysis of the conformations of native and base analog substituted retroviral and LTR-retrotransposon PPT primers. Chemistry & biology 15(3): 254-62. DOI: 10.1016/j.chembiol.2008.01.012
Consistent blind protein structure generation from NMR chemical shift data.
Shen Y, Lange O, Delaglio F, Rossi P, Aramini JM, Liu G, Eletsky A, Wu Y, Singarapu KK, Lemak A, et al. 2008. Consistent blind protein structure generation from NMR chemical shift data. Proceedings of the National Academy of Sciences of the United States of America 105(12): 4685-90. DOI: 10.1073/pnas.0800256105
Potent anti-prostate cancer agents derived from a novel androgen receptor down-regulating agent.
Purushottamachar P, Khandelwal A, Vasaitis TS, Bruno RD, Gediya LK, Njar VC. 2008. Potent anti-prostate cancer agents derived from a novel androgen receptor down-regulating agent. Bioorganic & medicinal chemistry 16(7): 3519-29. DOI: 10.1016/j.bmc.2008.02.031
Cis interactions of immunoreceptors with MHC and non-MHC ligands.
Held W, Mariuzza RA. 2008. Cis interactions of immunoreceptors with MHC and non-MHC ligands. Nature reviews. Immunology 8(4): 269-78. DOI: 10.1038/nri2278
Programmable assembly of a metabolic pathway enzyme in a pre-packaged reusable bioMEMS device.
Luo X, Lewandowski AT, Yi H, Payne GF, Ghodssi R, Bentley WE, Rubloff GW. 2008. Programmable assembly of a metabolic pathway enzyme in a pre-packaged reusable bioMEMS device. Lab on a chip 8(3): 420-30. DOI: 10.1039/b713756g
Identification of active sites of biomolecules. 1. Methyl-alpha-mannopyranoside and Fe(III).
Coskuner O, Bergeron DE, Rincon L, Hudgens JW, Gonzalez CA. 2008. Identification of active sites of biomolecules. 1. Methyl-alpha-mannopyranoside and Fe(III). The journal of physical chemistry. A 112(13): 2940-7. DOI: 10.1021/jp711759q
Delivery of acid sphingomyelinase in normal and niemann-pick disease mice using intercellular adhesion molecule-1-targeted polymer nanocarriers.
Garnacho C, Dhami R, Simone E, Dziubla T, Leferovich J, Schuchman EH, Muzykantov V, Muro S. 2008. Delivery of acid sphingomyelinase in normal and niemann-pick disease mice using intercellular adhesion molecule-1-targeted polymer nanocarriers. The Journal of pharmacology and experimental therapeutics 325(2): 400-8. DOI: 10.1124/jpet.107.133298
Focused dampening of antibody response to the immunodominant variable loops by engineered soluble gp140.
Selvarajah S, Puffer BA, Lee FH, Zhu P, Li Y, Wyatt R, Roux KH, Doms RW, Burton DR. 2008. Focused dampening of antibody response to the immunodominant variable loops by engineered soluble gp140. AIDS research and human retroviruses 24(2): 301-14. DOI: 10.1089/aid.2007.0158
The periplasmic domain of TolR from Haemophilus influenzae forms a dimer with a large hydrophobic groove: NMR solution structure and comparison to SAXS data.
Parsons LM, Grishaev A, Bax A. 2008. The periplasmic domain of TolR from Haemophilus influenzae forms a dimer with a large hydrophobic groove: NMR solution structure and comparison to SAXS data. Biochemistry 47(10): 3131-42. DOI: 10.1021/bi702283x