Publications

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A 'bioproduction breadboard': programming, assembling, and actuating cellular networks.
Zargar A, Payne GF, Bentley WE. 2015. A 'bioproduction breadboard': programming, assembling, and actuating cellular networks. Current opinion in biotechnology 36: 154-60. DOI: 10.1016/j.copbio.2015.08.017
Water Proton NMR for In Situ Detection of Insulin Aggregates.
Taraban MB, Truong HC, Feng Y, Jouravleva EV, Anisimov MA, Yu YB. 2015. Water Proton NMR for In Situ Detection of Insulin Aggregates. Journal of pharmaceutical sciences 104(12): 4132-4141. DOI: 10.1002/jps.24633
Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg(2+) Bound Structure in the Presence of Monovalent Ions.
Bergonzo C, Hall KB, Cheatham TE. 2015. Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg(2+) Bound Structure in the Presence of Monovalent Ions. The journal of physical chemistry. B 119(38): 12355-64. DOI: 10.1021/acs.jpcb.5b05190
Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering.
Venditti V, Schwieters CD, Grishaev A, Clore GM. 2015. Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering. Proceedings of the National Academy of Sciences of the United States of America 112(37): 11565-70. DOI: 10.1073/pnas.1515366112
The Mga Regulon but Not Deoxyribonuclease Sda1 of Invasive M1T1 Group A Streptococcus Contributes to In Vivo Selection of CovRS Mutations and Resistance to Innate Immune Killing Mechanisms.
Liu G, Feng W, Li D, Liu M, Nelson DC, Lei B. 2015. The Mga Regulon but Not Deoxyribonuclease Sda1 of Invasive M1T1 Group A Streptococcus Contributes to In Vivo Selection of CovRS Mutations and Resistance to Innate Immune Killing Mechanisms. Infection and immunity 83(11): 4293-303. DOI: 10.1128/IAI.00857-15
A positive cooperativity binding model between Ly49 natural killer cell receptors and the viral immunoevasin m157. KINETIC AND THERMODYNAMIC STUDIES.
Romasanta PN, Curto LM, Urtasun N, Sarratea MB, Chiappini S, Miranda MV, Delfino JM, Mariuzza RA, Fernández MM, Malchiodi EL. 2015. A positive cooperativity binding model between Ly49 natural killer cell receptors and the viral immunoevasin m157. KINETIC AND THERMODYNAMIC STUDIES. The Journal of biological chemistry 290(33): 20098-9. DOI: 10.1074/jbc.A113.532929
Middle region of the Borrelia burgdorferi surface-located protein 1 (Lmp1) interacts with host chondroitin-6-sulfate and independently facilitates infection.
Yang X, Lin YP, Heselpoth RD, Buyuktanir O, Qin J, Kung F, Nelson DC, Leong JM, Pal U. 2016. Middle region of the Borrelia burgdorferi surface-located protein 1 (Lmp1) interacts with host chondroitin-6-sulfate and independently facilitates infection. Cellular microbiology 18(1): 97-110. DOI: 10.1111/cmi.12487
Phosphorylation-induced Conformational Ensemble Switching in an Intrinsically Disordered Cancer/Testis Antigen.
He Y, Chen Y, Mooney SM, Rajagopalan K, Bhargava A, Sacho E, Weninger K, Bryan PN, Kulkarni P, Orban J. 2015. Phosphorylation-induced Conformational Ensemble Switching in an Intrinsically Disordered Cancer/Testis Antigen. The Journal of biological chemistry 290(41): 25090-102. DOI: 10.1074/jbc.M115.658583
Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2.
Vreven T, Moal IH, Vangone A, Pierce BG, Kastritis PL, Torchala M, Chaleil R, Jiménez-García B, Bates PA, Fernandez-Recio J, et al. 2015. Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2. Journal of molecular biology 427(19): 3031-41. DOI: 10.1016/j.jmb.2015.07.016
Reconstitution of Functionalized Transmembrane Domains of Receptor Proteins into Biomimetic Membranes.
Scott DR, Silin V, Nanda H. 2015. Reconstitution of Functionalized Transmembrane Domains of Receptor Proteins into Biomimetic Membranes. Langmuir : the ACS journal of surfaces and colloids 31(33): 9115-24. DOI: 10.1021/acs.langmuir.5b01990
Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins.
Helliwell EE, Vega-Arreguín J, Shi Z, Bailey B, Xiao S, Maximova SN, Tyler BM, Guiltinan MJ. 2016. Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins. Plant biotechnology journal 14(3): 875-86. DOI: 10.1111/pbi.12436
Histone H3 Ser57 and Thr58 phosphorylation in the brain of 5XFAD mice.
Anderson KW, Mast N, Pikuleva IA, Turko IV. 2015. Histone H3 Ser57 and Thr58 phosphorylation in the brain of 5XFAD mice. FEBS open bio 5: 550-6. DOI: 10.1016/j.fob.2015.06.009
Galeterone and VNPT55 induce proteasomal degradation of AR/AR-V7, induce significant apoptosis via cytochrome c release and suppress growth of castration resistant prostate cancer xenografts in vivo.
Kwegyir-Afful AK, Ramalingam S, Purushottamachar P, Ramamurthy VP, Njar VC. 2015. Galeterone and VNPT55 induce proteasomal degradation of AR/AR-V7, induce significant apoptosis via cytochrome c release and suppress growth of castration resistant prostate cancer xenografts in vivo. Oncotarget 6(29): 27440-60. DOI: 10.18632/oncotarget.4578
Probing Invisible, Excited Protein States by Non-Uniformly Sampled Pseudo-4D CEST Spectroscopy.
Long D, Delaglio F, Sekhar A, Kay LE. 2015. Probing Invisible, Excited Protein States by Non-Uniformly Sampled Pseudo-4D CEST Spectroscopy. Angewandte Chemie (International ed. in English) 54(36): 10507-11. DOI: 10.1002/anie.201504070
Pre-T-cell receptor binds MHC: Implications for thymocyte signaling and selection.
Yang X, Mariuzza RA. 2015. Pre-T-cell receptor binds MHC: Implications for thymocyte signaling and selection. Proceedings of the National Academy of Sciences of the United States of America 112(27): 8166-7. DOI: 10.1073/pnas.1510127112