Publications

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Formation of dAMP-glycerol and dAMP-Tris derivatives by Thermococcus kodakaraensis DNA primase.
Chemnitz Galal W, Pan M, Giulian G, Yuan W, Li S, Edwards JL, Marino JP, Kelman Z, Hurwitz J. 2012. Formation of dAMP-glycerol and dAMP-Tris derivatives by Thermococcus kodakaraensis DNA primase. The Journal of biological chemistry 287(20): 16220-9. DOI: 10.1074/jbc.M111.338160
Selection pressure on HIV-1 envelope by broadly neutralizing antibodies to the conserved CD4-binding site.
Wu X, Wang C, O'Dell S, Li Y, Keele BF, Yang Z, Imamichi H, Doria-Rose N, Hoxie JA, Connors M, et al. 2012. Selection pressure on HIV-1 envelope by broadly neutralizing antibodies to the conserved CD4-binding site. Journal of virology 86(10): 5844-56. DOI: 10.1128/JVI.07139-11
Electrodeposition of a biopolymeric hydrogel: potential for one-step protein electroaddressing.
Gray KM, Liba BD, Wang Y, Cheng Y, Rubloff GW, Bentley WE, Montembault A, Royaud I, David L, Payne GF. 2012. Electrodeposition of a biopolymeric hydrogel: potential for one-step protein electroaddressing. Biomacromolecules 13(4): 1181-9. DOI: 10.1021/bm3001155
Subsecond absolute quantitation of amine metabolites using isobaric tags for discovery of pathway activation in mammalian cells.
Yuan W, Anderson KW, Li S, Edwards JL. 2012. Subsecond absolute quantitation of amine metabolites using isobaric tags for discovery of pathway activation in mammalian cells. Analytical chemistry 84(6): 2892-9. DOI: 10.1021/ac203453t
NeXML: rich, extensible, and verifiable representation of comparative data and metadata.
Vos RA, Balhoff JP, Caravas JA, Holder MT, Lapp H, Maddison WP, Midford PE, Priyam A, Sukumaran J, Xia X, et al. 2012. NeXML: rich, extensible, and verifiable representation of comparative data and metadata. Systematic biology 61(4): 675-89. DOI: 10.1093/sysbio/sys025
LC-MS/MS biopharmaceutical glycoanalysis: identification of desirable reference material characteristics.
Schiel JE, Au J, He HJ, Phinney KW. 2012. LC-MS/MS biopharmaceutical glycoanalysis: identification of desirable reference material characteristics. Analytical and bioanalytical chemistry 403(8): 2279-89. DOI: 10.1007/s00216-012-5749-5
Characterization of DNA primase complex isolated from the archaeon, Thermococcus kodakaraensis.
Chemnitz Galal W, Pan M, Kelman Z, Hurwitz J. 2012. Characterization of DNA primase complex isolated from the archaeon, Thermococcus kodakaraensis. The Journal of biological chemistry 287(20): 16209-19. DOI: 10.1074/jbc.M111.338145
Reaction network governing diphosphine-protected gold nanocluster formation from nascent cationic platforms.
Pettibone JM, Hudgens JW. 2012. Reaction network governing diphosphine-protected gold nanocluster formation from nascent cationic platforms. Physical chemistry chemical physics : PCCP 14(12): 4142-54. DOI: 10.1039/c2cp22865c
Autophagy inhibition synergistically enhances anticancer efficacy of RAMBA, VN/12-1 in SKBR-3 cells, and tumor xenografts.
Godbole AM, Purushottamachar P, Martin MS, Daskalakis C, Njar VC. 2012. Autophagy inhibition synergistically enhances anticancer efficacy of RAMBA, VN/12-1 in SKBR-3 cells, and tumor xenografts. Molecular cancer therapeutics 11(4): 898-908. DOI: 10.1158/1535-7163.MCT-11-0860
PAPP2C interacts with the atypical disease resistance protein RPW8.2 and negatively regulates salicylic acid-dependent defense responses in Arabidopsis.
Wang WM, Ma XF, Zhang Y, Luo MC, Wang GL, Bellizzi M, Xiong XY, Xiao SY. 2012. PAPP2C interacts with the atypical disease resistance protein RPW8.2 and negatively regulates salicylic acid-dependent defense responses in Arabidopsis. Molecular plant 5(5): 1125-37. DOI: 10.1093/mp/sss008
The CMG (CDC45/RecJ, MCM, GINS) complex is a conserved component of the DNA replication system in all archaea and eukaryotes.
Makarova KS, Koonin EV, Kelman Z. 2012. The CMG (CDC45/RecJ, MCM, GINS) complex is a conserved component of the DNA replication system in all archaea and eukaryotes. Biology direct 7: 7. DOI: 10.1186/1745-6150-7-7
Intercellular adhesion molecule 1 engagement modulates sphingomyelinase and ceramide, supporting uptake of drug carriers by the vascular endothelium.
Serrano D, Bhowmick T, Chadha R, Garnacho C, Muro S. 2012. Intercellular adhesion molecule 1 engagement modulates sphingomyelinase and ceramide, supporting uptake of drug carriers by the vascular endothelium. Arteriosclerosis, thrombosis, and vascular biology 32(5): 1178-85. DOI: 10.1161/ATVBAHA.111.244186
Mutational tipping points for switching protein folds and functions.
He Y, Chen Y, Alexander PA, Bryan PN, Orban J. 2012. Mutational tipping points for switching protein folds and functions. Structure (London, England : 1993) 20(2): 283-91. DOI: 10.1016/j.str.2011.11.018
Yeast nuclear RNA processing.
Bernstein J, Toth EA. 2012. Yeast nuclear RNA processing. World journal of biological chemistry 3(1): 7-26. DOI: 10.4331/wjbc.v3.i1.7
Structural reorganization of the interleukin-7 signaling complex.
McElroy CA, Holland PJ, Zhao P, Lim JM, Wells L, Eisenstein E, Walsh ST. 2012. Structural reorganization of the interleukin-7 signaling complex. Proceedings of the National Academy of Sciences of the United States of America 109(7): 2503-8. DOI: 10.1073/pnas.1116582109