IBBR Publications

Found 18 results
Filters: Author is Valdes, James J  [Clear All Filters]
2013
Wu H-C, Tsao C-Y, Quan DN, Cheng Y, Servinsky MD, Carter KK, Jee KJ, Terrell JL, Zargar A, Rubloff GW, et al. Autonomous bacterial localization and gene expression based on nearby cell receptor density. Mol Syst Biol. 2013 ;9:636.
Adams BL, Carter KK, Guo M, Wu H-C, Tsao C-Y, Sintim HO, Valdes JJ, Bentley WE. Evolved Quorum Sensing Regulator, LsrR, for Altered Switching Functions. ACS Synth Biol. 2013 .
2012
Carter KK, Valdes JJ, Bentley WE. Pathway engineering via quorum sensing and sRNA riboregulators-interconnected networks and controllers. Metab Eng. 2012 ;14(3):281-8.
2011
Tsao C-Y, Wang L, Hashimoto Y, Yi H, March JC, DeLisa MP, Wood TK, Valdes JJ, Bentley WE. LuxS coexpression enhances yields of recombinant proteins in Escherichia coli in part through posttranscriptional control of GroEL. Appl Environ Microbiol. 2011 ;77(6):2141-52.
2010
Tsao C-Y, Hooshangi S, Wu H-C, Valdes JJ, Bentley WE. Autonomous induction of recombinant proteins by minimally rewiring native quorum sensing regulon of E. coli. Metab Eng. 2010 ;12(3):291-7.
Hebert CG, Gupta A, Fernandes R, Tsao C-Y, Valdes JJ, Bentley WE. Biological nanofactories target and activate epithelial cell surfaces for modulating bacterial quorum sensing and interspecies signaling. ACS Nano. 2010 ;4(11):6923-31.
2009
Wu H-C, Shi X-W, Tsao C-Y, Lewandowski AT, Fernandes R, Hung C-W, DeShong P, Kobatake E, Valdes JJ, Payne GF, et al. Biofabrication of antibodies and antigens via IgG-binding domain engineered with activatable pentatyrosine pro-tag. Biotechnol Bioeng. 2009 ;103(2):231-40.
Hebert CG, Valdes JJ, Bentley WE. In vitro and in vivo RNA interference mediated suppression of Tn-caspase-1 for improved recombinant protein production in High Five cell culture with the baculovirus expression vector system. Biotechnol Bioeng. 2009 ;104(2):390-9.
Hebert CG, Valdes JJ, Bentley WE. Investigating apoptosis: characterization and analysis of Trichoplusia ni-caspase-1 through overexpression and RNAi mediated silencing. Insect Biochem Mol Biol. 2009 ;39(2):113-24.
2008
Hebert CG, Valdes JJ, Bentley WE. Beyond silencing--engineering applications of RNA interference and antisense technology for altering cellular phenotype. Curr Opin Biotechnol. 2008 ;19(5):500-5.
2007
Kim EJeong, Kramer SF, Hebert CG, Valdes JJ, Bentley WE. Metabolic engineering of the baculovirus-expression system via inverse "shotgun" genomic analysis and RNA interference (dsRNA) increases product yield and cell longevity. Biotechnol Bioeng. 2007 ;98(3):645-54.
O'Connell KP, Kovaleva E, Campbell JH, Anderson PE, Brown SG, Davis DC, Valdes JJ, Welch RW, Bentley WE, van Beek NA. Production of a recombinant antibody fragment in whole insect larvae. Mol Biotechnol. 2007 ;36(1):44-51.
Li J, Attila C, Wang L, Wood TK, Valdes JJ, Bentley WE. Quorum sensing in Escherichia coli is signaled by AI-2/LsrR: effects on small RNA and biofilm architecture. J Bacteriol. 2007 ;189(16):6011-20.
2006
Li J, Wang L, Hashimoto Y, Tsao C-Y, Wood TK, Valdes JJ, Zafiriou E, Bentley WE. A stochastic model of Escherichia coli AI-2 quorum signal circuit reveals alternative synthesis pathways. Mol Syst Biol. 2006 ;2:67.
2005
Wang L, Hashimoto Y, Tsao C-Y, Valdes JJ, Bentley WE. Cyclic AMP (cAMP) and cAMP receptor protein influence both synthesis and uptake of extracellular autoinducer 2 in Escherichia coli. J Bacteriol. 2005 ;187(6):2066-76.
Wang L, Li J, March JC, Valdes JJ, Bentley WE. luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling. J Bacteriol. 2005 ;187(24):8350-60.
2003
Wu C-F, Valdes JJ, Bentley WE, Sekowski JW. DNA microarray for discrimination between pathogenic 0157:H7 EDL933 and non-pathogenic Escherichia coli strains. Biosens Bioelectron. 2003 ;19(1):1-8.
2002
Wu C-F, Cha HJoon, Valdes JJ, Bentley WE. GFP-visualized immobilized enzymes: degradation of paraoxon via organophosphorus hydrolase in a packed column. Biotechnol Bioeng. 2002 ;77(2):212-8.