Publications

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Assessment of protein disorder region predictions in CASP10.
Monastyrskyy B, Kryshtafovych A, Moult J, Tramontano A, Fidelis K. 2014. Assessment of protein disorder region predictions in CASP10. Proteins 82 Suppl 2: 127-37. DOI: 10.1002/prot.24391
Fluorinated dendrimers as imaging agents for ¹⁹F MRI.
Yu YB. 2022. Fluorinated dendrimers as imaging agents for ¹⁹F MRI. Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology 5(6): 646-61. DOI: 10.1002/wnan.1239
Identification and quantification of DNA repair protein apurinic/apyrimidinic endonuclease 1 (APE1) in human cells by liquid chromatography/isotope-dilution tandem mass spectrometry.
Kirkali G, Jaruga P, Reddy PT, Tona A, Nelson BC, Li M, Wilson DM, Dizdaroglu M. 2013. Identification and quantification of DNA repair protein apurinic/apyrimidinic endonuclease 1 (APE1) in human cells by liquid chromatography/isotope-dilution tandem mass spectrometry. PloS one 8(7): e69894. DOI: 10.1371/journal.pone.0069894
TLR stimulation initiates a CD39-based autoregulatory mechanism that limits macrophage inflammatory responses.
Cohen HB, Briggs KT, Marino JP, Ravid K, Robson SC, Mosser DM. 2013. TLR stimulation initiates a CD39-based autoregulatory mechanism that limits macrophage inflammatory responses. Blood 122(11): 1935-45. DOI: 10.1182/blood-2013-04-496216
Carboxylate-directed in vivo assembly of virus-like nanorods and tubes for the display of functional peptides and residues.
Brown AD, Naves L, Wang X, Ghodssi R, Culver JN. 2013. Carboxylate-directed in vivo assembly of virus-like nanorods and tubes for the display of functional peptides and residues. Biomacromolecules 14(9): 3123-9. DOI: 10.1021/bm400747k
Structural and biophysical insights into the role of CD4 and CD8 in T cell activation.
Li Y, Yin Y, Mariuzza RA. 2013. Structural and biophysical insights into the role of CD4 and CD8 in T cell activation. Frontiers in immunology 4: 206. DOI: 10.3389/fimmu.2013.00206
Split of chiral degeneracy in mechanical and structural properties of oligopeptide-polysaccharide biomaterials.
Taraban MB, Hyland LL, Yu YB. 2013. Split of chiral degeneracy in mechanical and structural properties of oligopeptide-polysaccharide biomaterials. Biomacromolecules 14(9): 3192-201. DOI: 10.1021/bm4008309
Materials science. Nature's other self-assemblers.
Bentley WE, Payne GF. 2013. Materials science. Nature's other self-assemblers. Science (New York, N.Y.) 341(6142): 136-7. DOI: 10.1126/science.1241562
Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.
Moretti R, Fleishman SJ, Agius R, Torchala M, Bates PA, Kastritis PL, Rodrigues JP, Trellet M, Bonvin AM, Cui M, et al. 2013. Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions. Proteins 81(11): 1980-7. DOI: 10.1002/prot.24356
Genetic Association of Peptidoglycan Recognition Protein Variants with Inflammatory Bowel Disease.
Zulfiqar F, Hozo I, Rangarajan S, Mariuzza RA, Dziarski R, Gupta D. 2013. Genetic Association of Peptidoglycan Recognition Protein Variants with Inflammatory Bowel Disease. PloS one 8(6): e67393. DOI: 10.1371/journal.pone.0067393
Evaluating template-based and template-free protein-protein complex structure prediction.
Vreven T, Hwang H, Pierce BG, Weng Z. 2014. Evaluating template-based and template-free protein-protein complex structure prediction. Briefings in bioinformatics 15(2): 169-76. DOI: 10.1093/bib/bbt047
Purification and Characterization of Biofilm-Associated EPS Exopolysaccharides from ESKAPE Organisms and Other Pathogens.
Bales PM, Renke EM, May SL, Shen Y, Nelson DC. 2013. Purification and Characterization of Biofilm-Associated EPS Exopolysaccharides from ESKAPE Organisms and Other Pathogens. PloS one 8(6): e67950. DOI: 10.1371/journal.pone.0067950
Structure of NKp65 bound to its keratinocyte ligand reveals basis for genetically linked recognition in natural killer gene complex.
Li Y, Wang Q, Chen S, Brown PH, Mariuzza RA. 2013. Structure of NKp65 bound to its keratinocyte ligand reveals basis for genetically linked recognition in natural killer gene complex. Proceedings of the National Academy of Sciences of the United States of America 110(28): 11505-10. DOI: 10.1073/pnas.1303300110
Uptake and intracellular trafficking of superantigens in dendritic cells.
Ganem MB, De Marzi MC, Fernández-Lynch MJ, Jancic C, Vermeulen M, Geffner J, Mariuzza RA, Fernández MM, Malchiodi EL. 2013. Uptake and intracellular trafficking of superantigens in dendritic cells. PloS one 8(6): e66244. DOI: 10.1371/journal.pone.0066244
Recognition of the Thomsen-Friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor.
Luo M, Velikovsky CA, Yang X, Siddiqui MA, Hong X, Barchi JJ, Gildersleeve JC, Pancer Z, Mariuzza RA. 2013. Recognition of the Thomsen-Friedenreich pancarcinoma carbohydrate antigen by a lamprey variable lymphocyte receptor. The Journal of biological chemistry 288(32): 23597-606. DOI: 10.1074/jbc.M113.480467