IBBR Publications

Found 16 results
Filters: Author is Lim, Kap  [Clear All Filters]
2014
Galkin A, Kulakova L, Lim K, Chen CZ, Zheng W, Turko IV, Herzberg O. Structural Basis for Inactivation of Giardia lamblia Carbamate Kinase by Disulfiram. J Biol Chem. 2014 .
2013
Lim K, Kulakova L, Galkin A, Herzberg O. Crystal structures of carbamate kinase from Giardia lamblia bound with citric acid and AMP-PNP. PLoS One. 2013 ;8(5):e64004.
2010
Lim K, Pullalarevu S, Surabian KTalin, Howard A, Suzuki T, Moult J, Herzberg O. Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member. Biochemistry. 2010 ;49(9):2031-41.
2008
Chao KL, Lim K, Lehmann C, Doseeva V, Howard AJ, Schwarz FP, Herzberg O. The Escherichia coli YdcF binds S-adenosyl-L-methionine and adopts an alpha/beta-fold characteristic of nucleotide-utilizing enzymes. Proteins. 2008 ;72(1):506-9.
2007
Lim K, Read RJ, Chen CCH, Tempczyk A, Wei M, Ye D, Wu C, Dunaway-Mariano D, Herzberg O. Swiveling domain mechanism in pyruvate phosphate dikinase. Biochemistry. 2007 ;46(51):14845-53.
2006
Teplyakov A, Lim K, Zhu P-P, Kapadia G, Chen CCH, Schwartz J, Howard A, Reddy PT, Peterkofsky A, Herzberg O. Structure of phosphorylated enzyme I, the phosphoenolpyruvate:sugar phosphotransferase system sugar translocation signal protein. Proc Natl Acad Sci U S A. 2006 ;103(44):16218-23.
2005
Lim K, Doseeva V, Demirkan ESarikaya, Pullalarevu S, Krajewski W, Galkin A, Howard A, Herzberg O. Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation. Proteins. 2005 ;58(3):759-63.
2004
Lim K, Sarikaya E, Galkin A, Krajewski W, Pullalarevu S, Shin J-H, Kelman Z, Howard A, Herzberg O. Novel structure and nucleotide binding properties of HI1480 from Haemophilus influenzae: a protein with no known sequence homologues. Proteins. 2004 ;56(3):564-71.
Galkin A, Kulakova L, Sarikaya E, Lim K, Howard A, Herzberg O. Structural insight into arginine degradation by arginine deiminase, an antibacterial and parasite drug target. J Biol Chem. 2004 ;279(14):14001-8.
2003
Lim K, Tempczyk A, Bonander N, Toedt J, Howard A, Eisenstein E, Herzberg O. A catalytic mechanism for D-Tyr-tRNATyr deacylase based on the crystal structure of Hemophilus influenzae HI0670. J Biol Chem. 2003 ;278(15):13496-502.
Lim K, Tempczyk A, Parsons JF, Bonander N, Toedt J, Kelman Z, Howard A, Eisenstein E, Herzberg O. Crystal structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function coexpressed with the recombinational DNA repair protein RecR. Proteins. 2003 ;50(2):375-9.
Lehmann C, Lim K, Chalamasetty VRao, Krajewski W, Melamud E, Galkin A, Howard A, Kelman Z, Reddy PT, Murzin AG, et al. The HI0073/HI0074 protein pair from Haemophilus influenzae is a member of a new nucleotidyltransferase family: structure, sequence analyses, and solution studies. Proteins. 2003 ;50(2):249-60.
Lim K, Zhang H, Tempczyk A, Krajewski W, Bonander N, Toedt J, Howard A, Eisenstein E, Herzberg O. Structure of the YibK methyltransferase from Haemophilus influenzae (HI0766): a cofactor bound at a site formed by a knot. Proteins. 2003 ;51(1):56-67.
2002
Gilliland GL, Teplyakov A, Obmolova G, Tordova M, Thanki N, Ladner J, Herzberg O, Lim K, Zhang H, Huang K, et al. Assisting functional assignment for hypothetical Heamophilus influenzae gene products through structural genomics. Curr Drug Targets Infect Disord. 2002 ;2(4):339-53.
Parsons JF, Lim K, Tempczyk A, Krajewski W, Eisenstein E, Herzberg O. From structure to function: YrbI from Haemophilus influenzae (HI1679) is a phosphatase. Proteins. 2002 ;46(4):393-404.
Lehmann C, Lim K, Toedt J, Krajewski W, Howard A, Eisenstein E, Herzberg O. Structure of 2C-methyl-D-erythrol-2,4-cyclodiphosphate synthase from Haemophilus influenzae: activation by conformational transition. Proteins. 2002 ;49(1):135-8.