Publications

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CoV3D: A database and resource for high resolution coronavirus protein structures.
Gowthaman R, Guest JD, Yin R, Adolf-Bryfogle J, Schief WR, Pierce BG. 2020. CoV3D: A database and resource for high resolution coronavirus protein structures. bioRxiv : the preprint server for biology : . DOI: 10.1101/2020.05.12.091983
Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation.
Seydoux E, Homad LJ, MacCamy AJ, Parks KR, Hurlburt NK, Jennewein MF, Akins NR, Stuart AB, Wan YH, Feng J, et al. 2020. Analysis of a SARS-CoV-2-Infected Individual Reveals Development of Potent Neutralizing Antibodies with Limited Somatic Mutation. Immunity 53(1): 98-105.e5. DOI: 10.1016/j.immuni.2020.06.001
Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2.
Bhokisham N, Liu Y, Brown AD, Payne GF, Culver JN, Bentley WE. 2020. Transglutaminase-mediated assembly of multi-enzyme pathway onto TMV brush surfaces for synthesis of bacterial autoinducer-2. Biofabrication 12(4): 045017. DOI: 10.1088/1758-5090/ab9e7a
Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain.
Mahinthichaichan P, Tsai CC, Payne GF, Shen J. 2020. Polyelectrolyte in Electric Field: Disparate Conformational Behavior along an Aminopolysaccharide Chain. ACS omega 5(21): 12016-12026. DOI: 10.1021/acsomega.0c00164
Avoidance of Self during CRISPR Immunization.
Weissman JL, Stoltzfus A, Westra ER, Johnson PLF. 2020. Avoidance of Self during CRISPR Immunization. Trends in microbiology 28(7): 543-553. DOI: 10.1016/j.tim.2020.02.005
In Vivo and In Vitro Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly.
Andrianov AK, Marin A, Wang R, Chowdhury A, Agnihotri P, Yunus AS, Pierce BG, Mariuzza RA, Fuerst TR. 2021. <i>In Vivo</i> and <i>In Vitro</i> Potency of Polyphosphazene Immunoadjuvants with Hepatitis C Virus Antigen and the Role of Their Supramolecular Assembly. Molecular pharmaceutics 18(2): 726-734. DOI: 10.1021/acs.molpharmaceut.0c00487
Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Wu D, Gallagher DT, Gowthaman R, Pierce BG, Mariuzza RA. 2020. Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen. Nature communications 11(1): 2908. DOI: 10.1038/s41467-020-16755-y
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, et al. 2020. Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature methods 17(7): 665-680. DOI: 10.1038/s41592-020-0848-2
Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR.
Briggs KT, Taraban MB, Yu YB. 2020. Quality assurance at the point-of-care: Noninvasively detecting vaccine freezing variability using water proton NMR. Vaccine 38(31): 4853-4860. DOI: 10.1016/j.vaccine.2020.05.049
Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection.
Kappagantu M, Collum TD, Dardick C, Culver JN. 2020. Viral Hacks of the Plant Vasculature: The Role of Phloem Alterations in Systemic Virus Infection. Annual review of virology 7(1): 351-370. DOI: 10.1146/annurev-virology-010320-072410
A redox-based electrogenetic CRISPR system to connect with and control biological information networks.
Bhokisham N, VanArsdale E, Stephens KT, Hauk P, Payne GF, Bentley WE. 2020. A redox-based electrogenetic CRISPR system to connect with and control biological information networks. Nature communications 11(1): 2427. DOI: 10.1038/s41467-020-16249-x
De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Sesterhenn F, Yang C, Bonet J, Cramer JT, Wen X, Wang Y, Chiang CI, Abriata LA, Kucharska I, Castoro G, et al. 2020. De novo protein design enables the precise induction of RSV-neutralizing antibodies. Science (New York, N.Y.) 368(6492): . DOI: 10.1126/science.aay5051
Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis.
Arbogast LW, Delaglio F, Brinson RG, Marino JP. 2020. Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis. Current protocols in protein science 100(1): e105. DOI: 10.1002/cpps.105
Intertwined mechanisms define transport of anti-ICAM nanocarriers across the endothelium and brain delivery of a therapeutic enzyme.
Manthe RL, Loeck M, Bhowmick T, Solomon M, Muro S. 2020. Intertwined mechanisms define transport of anti-ICAM nanocarriers across the endothelium and brain delivery of a therapeutic enzyme. Journal of controlled release : official journal of the Controlled Release Society 324: 181-193. DOI: 10.1016/j.jconrel.2020.05.009
Citron C-05 inhibits both the penetration and colonization of Xanthomonas citri subsp. citri to achieve resistance to citrus canker disease.
Fu H, Zhao M, Xu J, Tan L, Han J, Li D, Wang M, Xiao S, Ma X, Deng Z. 2020. Citron C-05 inhibits both the penetration and colonization of <i>Xanthomonas citri</i> subsp. <i>citri</i> to achieve resistance to citrus canker disease. Horticulture research 7(1): 58. DOI: 10.1038/s41438-020-0278-4