Publications

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Backbone assignment of HINT1 protein, a mouse histidine triad nucleotide binding protein.
Bai G, Feng B, Wang JB, Varney KM, Shapiro M. 2009. Backbone assignment of HINT1 protein, a mouse histidine triad nucleotide binding protein. Biomolecular NMR assignments 3(1): 57-9. DOI: 10.1007/s12104-008-9141-5
Arabidopsis 14-3-3 lambda is a positive regulator of RPW8-mediated disease resistance.
Yang X, Wang W, Coleman M, Orgil U, Feng J, Ma X, Ferl R, Turner JG, Xiao S. 2009. Arabidopsis 14-3-3 lambda is a positive regulator of RPW8-mediated disease resistance. The Plant journal : for cell and molecular biology 60(3): 539-50. DOI: 10.1111/j.1365-313X.2009.03978.x
Climbing mount probable: mutation as a cause of nonrandomness in evolution.
Stoltzfus A, Yampolsky LY. 2022. Climbing mount probable: mutation as a cause of nonrandomness in evolution. The Journal of heredity 100(5): 637-47. DOI: 10.1093/jhered/esp048
Interaction of the Tobacco mosaic virus replicase protein with a NAC domain transcription factor is associated with the suppression of systemic host defenses.
Wang X, Goregaoker SP, Culver JN. 2009. Interaction of the Tobacco mosaic virus replicase protein with a NAC domain transcription factor is associated with the suppression of systemic host defenses. Journal of virology 83(19): 9720-30. DOI: 10.1128/JVI.00941-09
High-affinity lamprey VLRA and VLRB monoclonal antibodies.
Tasumi S, Velikovsky CA, Xu G, Gai SA, Wittrup KD, Flajnik MF, Mariuzza RA, Pancer Z. 2009. High-affinity lamprey VLRA and VLRB monoclonal antibodies. Proceedings of the National Academy of Sciences of the United States of America 106(31): 12891-6. DOI: 10.1073/pnas.0904443106
In vitro and in vivo RNA interference mediated suppression of Tn-caspase-1 for improved recombinant protein production in High Five cell culture with the baculovirus expression vector system.
Hebert CG, Valdes JJ, Bentley WE. 2009. In vitro and in vivo RNA interference mediated suppression of Tn-caspase-1 for improved recombinant protein production in High Five cell culture with the baculovirus expression vector system. Biotechnology and bioengineering 104(2): 390-9. DOI: 10.1002/bit.22411
Stochastic noise in splicing machinery.
Melamud E, Moult J. 2009. Stochastic noise in splicing machinery. Nucleic acids research 37(14): 4873-86. DOI: 10.1093/nar/gkp471
TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.
Shen Y, Delaglio F, Cornilescu G, Bax A. 2009. TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. Journal of biomolecular NMR 44(4): 213-23. DOI: 10.1007/s10858-009-9333-z
Chemical shift anisotropy of imino 15N nuclei in Watson-Crick base pairs from magic angle spinning liquid crystal NMR and nuclear spin relaxation.
Grishaev A, Yao L, Ying J, Pardi A, Bax A. 2009. Chemical shift anisotropy of imino 15N nuclei in Watson-Crick base pairs from magic angle spinning liquid crystal NMR and nuclear spin relaxation. Journal of the American Chemical Society 131(27): 9490-1. DOI: 10.1021/ja903244s
Using the experimentally determined components of the overall rotational diffusion tensor to restrain molecular shape and size in NMR structure determination of globular proteins and protein-protein complexes.
Ryabov Y, Suh JY, Grishaev A, Clore GM, Schwieters CD. 2009. Using the experimentally determined components of the overall rotational diffusion tensor to restrain molecular shape and size in NMR structure determination of globular proteins and protein-protein complexes. Journal of the American Chemical Society 131(27): 9522-31. DOI: 10.1021/ja902336c
Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen.
Velikovsky CA, Deng L, Tasumi S, Iyer LM, Kerzic MC, Aravind L, Pancer Z, Mariuzza RA. 2009. Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen. Nature structural & molecular biology 16(7): 725-30. DOI: 10.1038/nsmb.1619
SHAMS: combining chemical modification of RNA with mass spectrometry to examine polypurine tract-containing RNA/DNA hybrids.
Turner KB, Yi-Brunozzi HY, Brinson RG, Marino JP, Fabris D, Le Grice SF. 2009. SHAMS: combining chemical modification of RNA with mass spectrometry to examine polypurine tract-containing RNA/DNA hybrids. RNA (New York, N.Y.) 15(8): 1605-13. DOI: 10.1261/rna.1615409
Structural implication of splicing stochastics.
Melamud E, Moult J. 2009. Structural implication of splicing stochastics. Nucleic acids research 37(14): 4862-72. DOI: 10.1093/nar/gkp444
X-ray structure and kinetic properties of ornithine transcarbamoylase from the human parasite Giardia lamblia.
Galkin A, Kulakova L, Wu R, Gong M, Dunaway-Mariano D, Herzberg O. 2009. X-ray structure and kinetic properties of ornithine transcarbamoylase from the human parasite Giardia lamblia. Proteins 76(4): 1049-53. DOI: 10.1002/prot.22469
Delivered dose: a drug-centric phenotype for chemotherapy dose individualization.
Yu YB. 2009. Delivered dose: a drug-centric phenotype for chemotherapy dose individualization. Pharmaceutical research 26(8): 1803-6. DOI: 10.1007/s11095-009-9913-3