Publications

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pH-Responsive Self-Assembly of Polysaccharide through a Rugged Energy Landscape.
Morrow BH, Payne GF, Shen J. 2015. pH-Responsive Self-Assembly of Polysaccharide through a Rugged Energy Landscape. Journal of the American Chemical Society 137(40): 13024-30. DOI: 10.1021/jacs.5b07761
Pore hydration states of KcsA potassium channels in membranes.
Blasic JR, Worcester DL, Gawrisch K, Gurnev P, Mihailescu M. 2015. Pore hydration states of KcsA potassium channels in membranes. The Journal of biological chemistry 290(44): 26765-75. DOI: 10.1074/jbc.M115.661819
Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA.
Malik SS, Coey CT, Varney KM, Pozharski E, Drohat AC. 2015. Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic acids research 43(19): 9541-52. DOI: 10.1093/nar/gkv890
Extreme Expression of DNA Repair Protein Apurinic/Apyrimidinic Endonuclease 1 (APE1) in Human Breast Cancer As Measured by Liquid Chromatography and Isotope Dilution Tandem Mass Spectrometry.
Coskun E, Jaruga P, Reddy PT, Dizdaroglu M. 2015. Extreme Expression of DNA Repair Protein Apurinic/Apyrimidinic Endonuclease 1 (APE1) in Human Breast Cancer As Measured by Liquid Chromatography and Isotope Dilution Tandem Mass Spectrometry. Biochemistry 54(38): 5787-90. DOI: 10.1021/acs.biochem.5b00928
Protein trafficking during plant innate immunity.
Wang WM, Liu PQ, Xu YJ, Xiao S. 2016. Protein trafficking during plant innate immunity. Journal of integrative plant biology 58(4): 284-98. DOI: 10.1111/jipb.12426
A 'bioproduction breadboard': programming, assembling, and actuating cellular networks.
Zargar A, Payne GF, Bentley WE. 2015. A 'bioproduction breadboard': programming, assembling, and actuating cellular networks. Current opinion in biotechnology 36: 154-60. DOI: 10.1016/j.copbio.2015.08.017
Water Proton NMR for In Situ Detection of Insulin Aggregates.
Taraban MB, Truong HC, Feng Y, Jouravleva EV, Anisimov MA, Yu YB. 2015. Water Proton NMR for In Situ Detection of Insulin Aggregates. Journal of pharmaceutical sciences 104(12): 4132-4141. DOI: 10.1002/jps.24633
Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg(2+) Bound Structure in the Presence of Monovalent Ions.
Bergonzo C, Hall KB, Cheatham TE. 2015. Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg(2+) Bound Structure in the Presence of Monovalent Ions. The journal of physical chemistry. B 119(38): 12355-64. DOI: 10.1021/acs.jpcb.5b05190
Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering.
Venditti V, Schwieters CD, Grishaev A, Clore GM. 2015. Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering. Proceedings of the National Academy of Sciences of the United States of America 112(37): 11565-70. DOI: 10.1073/pnas.1515366112
The Mga Regulon but Not Deoxyribonuclease Sda1 of Invasive M1T1 Group A Streptococcus Contributes to In Vivo Selection of CovRS Mutations and Resistance to Innate Immune Killing Mechanisms.
Liu G, Feng W, Li D, Liu M, Nelson DC, Lei B. 2015. The Mga Regulon but Not Deoxyribonuclease Sda1 of Invasive M1T1 Group A Streptococcus Contributes to In Vivo Selection of CovRS Mutations and Resistance to Innate Immune Killing Mechanisms. Infection and immunity 83(11): 4293-303. DOI: 10.1128/IAI.00857-15
A positive cooperativity binding model between Ly49 natural killer cell receptors and the viral immunoevasin m157. KINETIC AND THERMODYNAMIC STUDIES.
Romasanta PN, Curto LM, Urtasun N, Sarratea MB, Chiappini S, Miranda MV, Delfino JM, Mariuzza RA, Fernández MM, Malchiodi EL. 2015. A positive cooperativity binding model between Ly49 natural killer cell receptors and the viral immunoevasin m157. KINETIC AND THERMODYNAMIC STUDIES. The Journal of biological chemistry 290(33): 20098-9. DOI: 10.1074/jbc.A113.532929
Middle region of the Borrelia burgdorferi surface-located protein 1 (Lmp1) interacts with host chondroitin-6-sulfate and independently facilitates infection.
Yang X, Lin YP, Heselpoth RD, Buyuktanir O, Qin J, Kung F, Nelson DC, Leong JM, Pal U. 2016. Middle region of the Borrelia burgdorferi surface-located protein 1 (Lmp1) interacts with host chondroitin-6-sulfate and independently facilitates infection. Cellular microbiology 18(1): 97-110. DOI: 10.1111/cmi.12487
Phosphorylation-induced Conformational Ensemble Switching in an Intrinsically Disordered Cancer/Testis Antigen.
He Y, Chen Y, Mooney SM, Rajagopalan K, Bhargava A, Sacho E, Weninger K, Bryan PN, Kulkarni P, Orban J. 2015. Phosphorylation-induced Conformational Ensemble Switching in an Intrinsically Disordered Cancer/Testis Antigen. The Journal of biological chemistry 290(41): 25090-102. DOI: 10.1074/jbc.M115.658583
Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2.
Vreven T, Moal IH, Vangone A, Pierce BG, Kastritis PL, Torchala M, Chaleil R, Jiménez-García B, Bates PA, Fernandez-Recio J, et al. 2015. Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2. Journal of molecular biology 427(19): 3031-41. DOI: 10.1016/j.jmb.2015.07.016
Reconstitution of Functionalized Transmembrane Domains of Receptor Proteins into Biomimetic Membranes.
Scott DR, Silin V, Nanda H. 2015. Reconstitution of Functionalized Transmembrane Domains of Receptor Proteins into Biomimetic Membranes. Langmuir : the ACS journal of surfaces and colloids 31(33): 9115-24. DOI: 10.1021/acs.langmuir.5b01990