Publications

The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.
Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X, Moult J, Madupu R, Nelson WC, Dodson RJ, et al. 2005. The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Proceedings of the National Academy of Sciences of the United States of America 102(31): 10913-8.
Bacterial expression and one-step purification of an isotope-labeled heterotrimeric G-protein alpha-subunit.
Abdulaev NG, Zhang C, Dinh A, Ngo T, Bryan PN, Brabazon DM, Marino JP, Ridge KD. 2005. Bacterial expression and one-step purification of an isotope-labeled heterotrimeric G-protein alpha-subunit. Journal of biomolecular NMR 32(1): 31-40.
A new simple and high-yield synthesis of suberoylanilide hydroxamic acid and its inhibitory effect alone or in combination with retinoids on proliferation of human prostate cancer cells.
Gediya LK, Chopra P, Purushottamachar P, Maheshwari N, Njar VC. 2005. A new simple and high-yield synthesis of suberoylanilide hydroxamic acid and its inhibitory effect alone or in combination with retinoids on proliferation of human prostate cancer cells. Journal of medicinal chemistry 48(15): 5047-51.
Structure of HI0073 from Haemophilus influenzae, the nucleotide-binding domain of a two-protein nucleotidyl transferase.
Lehmann C, Pullalarevu S, Krajewski W, Willis MA, Galkin A, Howard A, Herzberg O. 2005. Structure of HI0073 from Haemophilus influenzae, the nucleotide-binding domain of a two-protein nucleotidyl transferase. Proteins 60(4): 807-11.
Binding of natural variants of staphylococcal superantigens SEG and SEI to TCR and MHC class II molecule.
Fernández MM, De Marzi MC, Berguer P, Burzyn D, Langley RJ, Piazzon I, Mariuzza RA, Malchiodi EL. 2006. Binding of natural variants of staphylococcal superantigens SEG and SEI to TCR and MHC class II molecule. Molecular immunology 43(7): 927-38.
Backbone dynamics of the olfactory marker protein as studied by 15N NMR relaxation measurements.
Gitti RK, Wright NT, Margolis JW, Varney KM, Weber DJ, Margolis FL. 2005. Backbone dynamics of the olfactory marker protein as studied by 15N NMR relaxation measurements. Biochemistry 44(28): 9673-9.
Improved metal cluster deposition on a genetically engineered tobacco mosaic virus template.
Lee SY, Royston E, Culver JN, Harris MT. 2005. Improved metal cluster deposition on a genetically engineered tobacco mosaic virus template. Nanotechnology 16(7): S435-41. DOI: 10.1088/0957-4484/16/7/019
The exchangeability of amino acids in proteins.
Yampolsky LY, Stoltzfus A. 2005. The exchangeability of amino acids in proteins. Genetics 170(4): 1459-72.
A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction.
Moult J. 2005. A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction. Current opinion in structural biology 15(3): 285-9.
Association between Archaeal prolyl- and leucyl-tRNA synthetases enhances tRNA(Pro) aminoacylation.
Praetorius-Ibba M, Rogers TE, Samson R, Kelman Z, Ibba M. 2005. Association between Archaeal prolyl- and leucyl-tRNA synthetases enhances tRNA(Pro) aminoacylation. The Journal of biological chemistry 280(28): 26099-104.
Analysis of the structure and composition of individual lipoplex particles by flow fluorometry.
Pozharski EV, Macdonald RC. 2005. Analysis of the structure and composition of individual lipoplex particles by flow fluorometry. Analytical biochemistry 341(2): 230-40.
Measurement of ribose carbon chemical shift tensors for A-form RNA by liquid crystal NMR spectroscopy.
Bryce DL, Grishaev A, Bax A. 2005. Measurement of ribose carbon chemical shift tensors for A-form RNA by liquid crystal NMR spectroscopy. Journal of the American Chemical Society 127(20): 7387-96.
Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2.
Pozharski E, Moulin A, Hewagama A, Shanafelt AB, Petsko GA, Ringe D. 2005. Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2. Journal of molecular biology 349(3): 570-82.
HU-alpha binds to the putative double-stranded DNA mimic HI1450 from Haemophilus influenzae.
Parsons LM, Liu F, Orban J. 2005. HU-alpha binds to the putative double-stranded DNA mimic HI1450 from Haemophilus influenzae. Protein science : a publication of the Protein Society 14(6): 1684-7.
Calcium-binding properties of wild-type and EF-hand mutants of S100B in the presence and absence of a peptide derived from the C-terminal negative regulatory domain of p53.
Markowitz J, Rustandi RR, Varney KM, Wilder PT, Udan R, Wu SL, Horrocks WD, Weber DJ. 2005. Calcium-binding properties of wild-type and EF-hand mutants of S100B in the presence and absence of a peptide derived from the C-terminal negative regulatory domain of p53. Biochemistry 44(19): 7305-14.