Publications

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Critical assessment of methods of protein structure prediction (CASP)-round V.
Moult J, Fidelis K, Zemla A, Hubbard T. 2003. Critical assessment of methods of protein structure prediction (CASP)-round V. Proteins 53 Suppl 6: 334-9.
Archeal DNA replication: eukaryal proteins in a bacterial context.
Grabowski B, Kelman Z. 2003. Archeal DNA replication: eukaryal proteins in a bacterial context. Annual review of microbiology 57: 487-516.
Dissecting cooperative and additive binding energetics in the affinity maturation pathway of a protein-protein interface.
Yang J, Swaminathan CP, Huang Y, Guan R, Cho S, Kieke MC, Kranz DM, Mariuzza RA, Sundberg EJ. 2003. Dissecting cooperative and additive binding energetics in the affinity maturation pathway of a protein-protein interface. The Journal of biological chemistry 278(50): 50412-21.
Expression, crystallization and preliminary crystallographic analysis of the extracellular IgV-like domain of the human natural killer cell inhibitory receptor p75/AIRM1.
Dimasi N, Moretta L, Biassoni R, Mariuzza RA. 2003. Expression, crystallization and preliminary crystallographic analysis of the extracellular IgV-like domain of the human natural killer cell inhibitory receptor p75/AIRM1. Acta crystallographica. Section D, Biological crystallography 59(Pt 10): 1856-8.
Substrate requirements for duplex DNA translocation by the eukaryal and archaeal minichromosome maintenance helicases.
Shin JH, Jiang Y, Grabowski B, Hurwitz J, Kelman Z. 2003. Substrate requirements for duplex DNA translocation by the eukaryal and archaeal minichromosome maintenance helicases. The Journal of biological chemistry 278(49): 49053-62.
Direct observation of dipolar couplings between distant protons in weakly aligned nucleic acids.
Boisbouvier J, Delaglio F, Bax A. 2003. Direct observation of dipolar couplings between distant protons in weakly aligned nucleic acids. Proceedings of the National Academy of Sciences of the United States of America 100(20): 11333-8.
Structural, energetic, and functional analysis of a protein-protein interface at distinct stages of affinity maturation.
Sundberg EJ, Andersen PS, Schlievert PM, Karjalainen K, Mariuzza RA. 2003. Structural, energetic, and functional analysis of a protein-protein interface at distinct stages of affinity maturation. Structure (London, England : 1993) 11(9): 1151-61.
Exploration of the P6/P7 region of the peptide-binding site of the human class II major histocompatability complex protein HLA-DR1.
Zavala-Ruiz Z, Sundberg EJ, Stone JD, DeOliveira DB, Chan IC, Svendsen J, Mariuzza RA, Stern LJ. 2003. Exploration of the P6/P7 region of the peptide-binding site of the human class II major histocompatability complex protein HLA-DR1. The Journal of biological chemistry 278(45): 44904-12.
Cloning and expression of the gene for a novel protein from Mycobacterium smegmatis with functional similarity to eukaryotic calmodulin.
Reddy PT, Prasad CR, Reddy PH, Reeder D, McKenney K, Jaffe H, Dimitrova MN, Ginsburg A, Peterkofsky A, Murthy PS. 2003. Cloning and expression of the gene for a novel protein from Mycobacterium smegmatis with functional similarity to eukaryotic calmodulin. Journal of bacteriology 185(17): 5263-8.
Tobacco mosaic virus induced alterations in the gene expression profile of Arabidopsis thaliana.
Golem S, Culver JN. 2003. Tobacco mosaic virus induced alterations in the gene expression profile of Arabidopsis thaliana. Molecular plant-microbe interactions : MPMI 16(8): 681-8.
Chitosan scaffolds for biomolecular assembly: coupling nucleic acid probes for detecting hybridization.
Yi H, Wu LQ, Sumner JJ, Gillespie JB, Payne GF, Bentley WE. 2003. Chitosan scaffolds for biomolecular assembly: coupling nucleic acid probes for detecting hybridization. Biotechnology and bioengineering 83(6): 646-52.
Slow intracellular trafficking of catalase nanoparticles targeted to ICAM-1 protects endothelial cells from oxidative stress.
Muro S, Cui X, Gajewski C, Murciano JC, Muzykantov VR, Koval M. 2003. Slow intracellular trafficking of catalase nanoparticles targeted to ICAM-1 protects endothelial cells from oxidative stress. American journal of physiology. Cell physiology 285(5): C1339-47.
Functional analysis of the TCR binding domain of toxic shock syndrome toxin-1 predicts further diversity in MHC class II/superantigen/TCR ternary complexes.
McCormick JK, Tripp TJ, Llera AS, Sundberg EJ, Dinges MM, Mariuzza RA, Schlievert PM. 2003. Functional analysis of the TCR binding domain of toxic shock syndrome toxin-1 predicts further diversity in MHC class II/superantigen/TCR ternary complexes. Journal of immunology (Baltimore, Md. : 1950) 171(3): 1385-92.
JE-TROSY: combined J- and TROSY-spectroscopy for the measurement of one-bond couplings in macromolecules.
Luy B, Marino JP. 2003. JE-TROSY: combined J- and TROSY-spectroscopy for the measurement of one-bond couplings in macromolecules. Journal of magnetic resonance (San Diego, Calif. : 1997) 163(1): 92-8.
Quantitative protein profiling in heart mitochondria from diabetic rats.
Turko IV, Murad F. 2003. Quantitative protein profiling in heart mitochondria from diabetic rats. The Journal of biological chemistry 278(37): 35844-9.