Publications

Filter Year

Bacteriophage Endolysin treatment for systemic infection of Streptococcus iniae in hybrid striped bass.
Deshotel MB, Dave UM, Farmer B, Kemboi D, Nelson DC. 2023. Bacteriophage Endolysin treatment for systemic infection of Streptococcus iniae in hybrid striped bass. Fish & shellfish immunology : 109296. DOI: 10.1016/j.fsi.2023.109296
A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs.
Dey D, Qing E, He Y, Chen Y, Jennings B, Cohn W, Singh S, Gakhar L, Schnicker NJ, Pierce BG, et al. 2023. A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nature communications 14(1): 8358. DOI: 10.1038/s41467-023-44076-3
Comparative proteomic analysis identifies proteins associated with arbuscular mycorrhizal symbiosis in Poncirus trifoliata.
Yu H, Ji C, Zheng Z, Yu M, Liu Y, Xiao S, Pan Z. 2023. Comparative proteomic analysis identifies proteins associated with arbuscular mycorrhizal symbiosis in <i>Poncirus trifoliata</i>. Frontiers in plant science 14: 1294086. DOI: 10.3389/fpls.2023.1294086
A biodegradable "one-for-all" nanoparticle for multimodality imaging and enhanced photothermal treatment of breast cancer.
Hsu JC, Barragan D, Tward AE, Hajfathalian M, Amirshaghaghi A, Mossburg KJ, Rosario-Berríos DN, Bouché M, Andrianov AK, James Delikatny E, et al. 2023. A biodegradable "one-for-all" nanoparticle for multimodality imaging and enhanced photothermal treatment of breast cancer. bioRxiv : the preprint server for biology : . DOI: 10.1101/2023.11.28.568885
Evaluation of AlphaFold Antibody-Antigen Modeling with Implications for Improving Predictive Accuracy.
Yin R, Pierce BG. 2023. Evaluation of AlphaFold Antibody-Antigen Modeling with Implications for Improving Predictive Accuracy. Protein science : a publication of the Protein Society : e4865. DOI: 10.1002/pro.4865
Biomolecular dynamics in the 21st century.
Brooks CL, MacKerell AD, Post CB, Nilsson L. 2023. Biomolecular dynamics in the 21st century. Biochimica et biophysica acta. General subjects : 130534. DOI: 10.1016/j.bbagen.2023.130534
Structural basis for T cell recognition of cancer neoantigens and implications for predicting neoepitope immunogenicity.
Mariuzza RA, Wu D, Pierce BG. 2023. Structural basis for T cell recognition of cancer neoantigens and implications for predicting neoepitope immunogenicity. Frontiers in immunology 14: 1303304. DOI: 10.3389/fimmu.2023.1303304
Characterizing Adeno-Associated Virus Capsids with Both Denaturing and Intact Analysis Methods.
Ryan JP, Kostelic MM, Hsieh CC, Powers J, Aspinwall C, Dodds JN, Schiel JE, Marty MT, Baker ES. 2023. Characterizing Adeno-Associated Virus Capsids with Both Denaturing and Intact Analysis Methods. Journal of the American Society for Mass Spectrometry : . DOI: 10.1021/jasms.3c00321
Hydrogen-Deuterium Exchange Dynamics of NISTmAb Measured by Small Angle Neutron Scattering.
Donnelly RB, Pingali SV, Heroux L, Brinson RG, Wagner NJ, Liu Y. 2023. Hydrogen-Deuterium Exchange Dynamics of NISTmAb Measured by Small Angle Neutron Scattering. Molecular pharmaceutics : . DOI: 10.1021/acs.molpharmaceut.3c00751
Cryo-EM and AFM visualize linear polyorganophosphazene: individual chains and single-chain assemblies with proteins.
Andrianov A, Hlushko R, Pozharski E, Prabhu V. 2023. Cryo-EM and AFM visualize linear polyorganophosphazene: individual chains and single-chain assemblies with proteins. Research square : . DOI: 10.21203/rs.3.rs-3411603/v1
Leaf abaxial immunity to powdery mildew in Arabidopsis is conferred by multiple defense mechanisms.
Wu Y, Sexton WK, Zhang Q, Bloodgood D, Wu Y, Hooks C, Coker F, Vasquez A, Wei CI, Xiao S. 2023. Leaf abaxial immunity to powdery mildew in Arabidopsis is conferred by multiple defense mechanisms. Journal of experimental botany : . DOI: 10.1093/jxb/erad450
Hydrophilic Interaction Liquid Chromatography at Subzero Temperature for Hydrogen-Deuterium Exchange Mass Spectrometry.
Anderson KW, Hudgens JW. 2023. Hydrophilic Interaction Liquid Chromatography at Subzero Temperature for Hydrogen-Deuterium Exchange Mass Spectrometry. Journal of the American Society for Mass Spectrometry : . DOI: 10.1021/jasms.3c00243
Critical assessment of methods of protein structure prediction (CASP)-Round XV.
Kryshtafovych A, Schwede T, Topf M, Fidelis K, Moult J. 2023. Critical assessment of methods of protein structure prediction (CASP)-Round XV. Proteins : . DOI: 10.1002/prot.26617
Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment.
Lensink MF, Brysbaert G, Raouraoua N, Bates PA, Giulini M, Honorato RV, van Noort C, Teixeira JMC, Bonvin AMJJ, Kong R, et al. 2023. Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment. Proteins : . DOI: 10.1002/prot.26609
Effects of glycans and hinge on dynamics in the IgG1 Fc.
Bergonzo C, Hoopes JT, Kelman Z, Gallagher DT. 2023. Effects of glycans and hinge on dynamics in the IgG1 Fc. Journal of biomolecular structure & dynamics : 1-9. DOI: 10.1080/07391102.2023.2270749