Publications

A graph-theoretic algorithm for comparative modeling of protein structure.
Samudrala R, Moult J. 1998. A graph-theoretic algorithm for comparative modeling of protein structure. Journal of molecular biology 279(1): 287-302.
A photoaffinity probe covalently modifies the catalytic site of the cGMP-binding cGMP-specific phosphodiesterase (PDE-5).
Corbin JD, Beasley A, Turko IV, Haik TL, Mangum KA, Wells JN, Francis SH, Sekhar KR. 1998. A photoaffinity probe covalently modifies the catalytic site of the cGMP-binding cGMP-specific phosphodiesterase (PDE-5). Cell biochemistry and biophysics 29(1-2): 145-57.
Poly[di(carboxylatophenoxy)phosphazene] (PCPP) is a potent immunoadjuvant for an influenza vaccine.
Payne LG, Jenkins SA, Woods AL, Grund EM, Geribo WE, Loebelenz JR, Andrianov AK, Roberts BE. 1998. Poly[di(carboxylatophenoxy)phosphazene] (PCPP) is a potent immunoadjuvant for an influenza vaccine. Vaccine 16(1): 92-8.
Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly.
Kelman Z, Yuzhakov A, Andjelkovic J, O'Donnell M. 1998. Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly. The EMBO journal 17(8): 2436-49.
Intersubunit interactions allowing a carboxylate mutant coat protein to inhibit tobamovirus disassembly.
Lu B, Taraporewala F, Stubbs G, Culver JN. 1998. Intersubunit interactions allowing a carboxylate mutant coat protein to inhibit tobamovirus disassembly. Virology 244(1): 13-9.
Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase.
Banerjee S, Pieper U, Kapadia G, Pannell LK, Herzberg O. 1998. Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase. Biochemistry 37(10): 3286-96.
Processivity of DNA polymerases: two mechanisms, one goal.
Kelman Z, Hurwitz J, O'Donnell M. 1998. Processivity of DNA polymerases: two mechanisms, one goal. Structure (London, England : 1993) 6(2): 121-5.
Conformation of the sebacyl beta1Lys82-beta2Lys82 crosslink in T-state human hemoglobin.
Ji X, Braxenthaler M, Moult J, Fronticelli C, Bucci E, Gilliland GL. 1998. Conformation of the sebacyl beta1Lys82-beta2Lys82 crosslink in T-state human hemoglobin. Proteins 30(3): 309-20.
Hybrid bilayer membranes in air and water: infrared spectroscopy and neutron reflectivity studies.
Meuse CW, Krueger S, Majkrzak CF, Dura JA, Fu J, Connor JT, Plant AL. 1998. Hybrid bilayer membranes in air and water: infrared spectroscopy and neutron reflectivity studies. Biophysical journal 74(3): 1388-98.
An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction.
Samudrala R, Moult J. 1998. An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction. Journal of molecular biology 275(5): 895-916.
Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii.
Pieper U, Kapadia G, Mevarech M, Herzberg O. 1998. Structural features of halophilicity derived from the crystal structure of dihydrofolate reductase from the Dead Sea halophilic archaeon, Haloferax volcanii. Structure (London, England : 1993) 6(1): 75-88.
Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Concha NO, Rasmussen BA, Bush K, Herzberg O. 1997. Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis. Protein science : a publication of the Protein Society 6(12): 2671-6.
In vitro infection and replication of hepatitis E virus in primary cynomolgus macaque hepatocytes.
Tam AW, White R, Yarbough PO, Murphy BJ, McAtee CP, Lanford RE, Fuerst TR. 1997. In vitro infection and replication of hepatitis E virus in primary cynomolgus macaque hepatocytes. Virology 238(1): 94-102.
Chaos in protein dynamics.
Braxenthaler M, Unger R, Auerbach D, Given JA, Moult J. 1997. Chaos in protein dynamics. Proteins 29(4): 417-25.
DNA polymerase delta isolated from Schizosaccharomyces pombe contains five subunits.
Zuo S, Gibbs E, Kelman Z, Wang TS, O'Donnell M, MacNeill SA, Hurwitz J. 1997. DNA polymerase delta isolated from Schizosaccharomyces pombe contains five subunits. Proceedings of the National Academy of Sciences of the United States of America 94(21): 11244-9.