Publications

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Structure of YciI from Haemophilus influenzae (HI0828) reveals a ferredoxin-like alpha/beta-fold with a histidine/aspartate centered catalytic site.
Willis MA, Song F, Zhuang Z, Krajewski W, Chalamasetty VR, Reddy P, Howard A, Dunaway-Mariano D, Herzberg O. 2005. Structure of YciI from Haemophilus influenzae (HI0828) reveals a ferredoxin-like alpha/beta-fold with a histidine/aspartate centered catalytic site. Proteins 59(3): 648-52.
Thermo-biolithography: a technique for patterning nucleic acids and proteins.
Fernandes R, Yi H, Wu LQ, Rubloff GW, Ghodssi R, Bentley WE, Payne GF. 2004. Thermo-biolithography: a technique for patterning nucleic acids and proteins. Langmuir : the ACS journal of surfaces and colloids 20(3): 906-13.
Crystal structure of human peptidoglycan recognition protein S (PGRP-S) at 1.70 A resolution.
Guan R, Wang Q, Sundberg EJ, Mariuzza RA. 2005. Crystal structure of human peptidoglycan recognition protein S (PGRP-S) at 1.70 A resolution. Journal of molecular biology 347(4): 683-91.
Analysis of free hormone fractions by an ultrafast immunoextraction/displacement immunoassay: studies using free thyroxine as a model system.
Clarke W, Schiel JE, Moser A, Hage DS. 2005. Analysis of free hormone fractions by an ultrafast immunoextraction/displacement immunoassay: studies using free thyroxine as a model system. Analytical chemistry 77(6): 1859-66.
Untangling the effects of codon mutation and amino acid exchangeability.
Yampolsky LY, Stoltzfus A. 2005. Untangling the effects of codon mutation and amino acid exchangeability. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing : 433-44.
Signal-directed sequential assembly of biomolecules on patterned surfaces.
Yi H, Wu LQ, Ghodssi R, Rubloff GW, Payne GF, Bentley WE. 2005. Signal-directed sequential assembly of biomolecules on patterned surfaces. Langmuir : the ACS journal of surfaces and colloids 21(6): 2104-7.
Crystal structures of 2-methylisocitrate lyase in complex with product and with isocitrate inhibitor provide insight into lyase substrate specificity, catalysis and evolution.
Liu S, Lu Z, Han Y, Melamud E, Dunaway-Mariano D, Herzberg O. 2005. Crystal structures of 2-methylisocitrate lyase in complex with product and with isocitrate inhibitor provide insight into lyase substrate specificity, catalysis and evolution. Biochemistry 44(8): 2949-62.
Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces.
Li Y, Huang Y, Swaminathan CP, Smith-Gill SJ, Mariuzza RA. 2005. Magnitude of the hydrophobic effect at central versus peripheral sites in protein-protein interfaces. Structure (London, England : 1993) 13(2): 297-307.
Interaction of the tobacco mosaic virus replicase protein with the Aux/IAA protein PAP1/IAA26 is associated with disease development.
Padmanabhan MS, Goregaoker SP, Golem S, Shiferaw H, Culver JN. 2005. Interaction of the tobacco mosaic virus replicase protein with the Aux/IAA protein PAP1/IAA26 is associated with disease development. Journal of virology 79(4): 2549-58.
Stereocontrolled solid-phase synthesis of a 90-membered library of indoline-alkaloid-like polycycles from an enantioenriched aminoindoline scaffold.
Gan Z, Reddy PT, Quevillon S, Couve-Bonnaire S, Arya P. 2005. Stereocontrolled solid-phase synthesis of a 90-membered library of indoline-alkaloid-like polycycles from an enantioenriched aminoindoline scaffold. Angewandte Chemie (International ed. in English) 44(9): 1366-8.
Structural polymorphism of Methanothermobacter thermautotrophicus MCM.
Chen YJ, Yu X, Kasiviswanathan R, Shin JH, Kelman Z, Egelman EH. 2005. Structural polymorphism of Methanothermobacter thermautotrophicus MCM. Journal of molecular biology 346(2): 389-94.
piggyBac internal sequences are necessary for efficient transformation of target genomes.
Li X, Harrell RA, Handler AM, Beam T, Hennessy K, Fraser MJ. 2005. piggyBac internal sequences are necessary for efficient transformation of target genomes. Insect molecular biology 14(1): 17-30.
Use of a restriction enzyme-digested PCR product as substrate for helicase assays.
Shin JH, Reeve JN, Kelman Z. 2005. Use of a restriction enzyme-digested PCR product as substrate for helicase assays. Nucleic acids research 33(1): e8.
NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog.
Yeh DC, Parsons LM, Parsons JF, Liu F, Eisenstein E, Orban J. 2005. NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog. Protein science : a publication of the Protein Society 14(2): 424-30.
Vesicle--biopolymer gels: networks of surfactant vesicles connected by associating biopolymers.
Lee JH, Gustin JP, Chen T, Payne GF, Raghavan SR. 2005. Vesicle--biopolymer gels: networks of surfactant vesicles connected by associating biopolymers. Langmuir : the ACS journal of surfaces and colloids 21(1): 26-33.