Publications

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Crystal structures representing the Michaelis complex and the thiouronium reaction intermediate of Pseudomonas aeruginosa arginine deiminase.
Galkin A, Lu X, Dunaway-Mariano D, Herzberg O. 2005. Crystal structures representing the Michaelis complex and the thiouronium reaction intermediate of Pseudomonas aeruginosa arginine deiminase. The Journal of biological chemistry 280(40): 34080-7.
ABACUS, a direct method for protein NMR structure computation via assembly of fragments.
Grishaev A, Steren CA, Wu B, Pineda-Lucena A, Arrowsmith C, Llinás M. 2005. ABACUS, a direct method for protein NMR structure computation via assembly of fragments. Proteins 61(1): 36-43.
Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.
Li Y, Huang Y, Lue J, Quandt JA, Martin R, Mariuzza RA. 2005. Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule. The EMBO journal 24(17): 2968-79.
Structural basis for recognition of the T cell adaptor protein SLP-76 by the SH3 domain of phospholipase Cgamma1.
Deng L, Velikovsky CA, Swaminathan CP, Cho S, Mariuzza RA. 2005. Structural basis for recognition of the T cell adaptor protein SLP-76 by the SH3 domain of phospholipase Cgamma1. Journal of molecular biology 352(1): 1-10.
The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.
Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X, Moult J, Madupu R, Nelson WC, Dodson RJ, et al. 2005. The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Proceedings of the National Academy of Sciences of the United States of America 102(31): 10913-8.
Bacterial expression and one-step purification of an isotope-labeled heterotrimeric G-protein alpha-subunit.
Abdulaev NG, Zhang C, Dinh A, Ngo T, Bryan PN, Brabazon DM, Marino JP, Ridge KD. 2005. Bacterial expression and one-step purification of an isotope-labeled heterotrimeric G-protein alpha-subunit. Journal of biomolecular NMR 32(1): 31-40.
A new simple and high-yield synthesis of suberoylanilide hydroxamic acid and its inhibitory effect alone or in combination with retinoids on proliferation of human prostate cancer cells.
Gediya LK, Chopra P, Purushottamachar P, Maheshwari N, Njar VC. 2005. A new simple and high-yield synthesis of suberoylanilide hydroxamic acid and its inhibitory effect alone or in combination with retinoids on proliferation of human prostate cancer cells. Journal of medicinal chemistry 48(15): 5047-51.
Structure of HI0073 from Haemophilus influenzae, the nucleotide-binding domain of a two-protein nucleotidyl transferase.
Lehmann C, Pullalarevu S, Krajewski W, Willis MA, Galkin A, Howard A, Herzberg O. 2005. Structure of HI0073 from Haemophilus influenzae, the nucleotide-binding domain of a two-protein nucleotidyl transferase. Proteins 60(4): 807-11.
Binding of natural variants of staphylococcal superantigens SEG and SEI to TCR and MHC class II molecule.
Fernández MM, De Marzi MC, Berguer P, Burzyn D, Langley RJ, Piazzon I, Mariuzza RA, Malchiodi EL. 2006. Binding of natural variants of staphylococcal superantigens SEG and SEI to TCR and MHC class II molecule. Molecular immunology 43(7): 927-38.
Backbone dynamics of the olfactory marker protein as studied by 15N NMR relaxation measurements.
Gitti RK, Wright NT, Margolis JW, Varney KM, Weber DJ, Margolis FL. 2005. Backbone dynamics of the olfactory marker protein as studied by 15N NMR relaxation measurements. Biochemistry 44(28): 9673-9.
Improved metal cluster deposition on a genetically engineered tobacco mosaic virus template.
Lee SY, Royston E, Culver JN, Harris MT. 2005. Improved metal cluster deposition on a genetically engineered tobacco mosaic virus template. Nanotechnology 16(7): S435-41. DOI: 10.1088/0957-4484/16/7/019
The exchangeability of amino acids in proteins.
Yampolsky LY, Stoltzfus A. 2005. The exchangeability of amino acids in proteins. Genetics 170(4): 1459-72.
A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction.
Moult J. 2005. A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction. Current opinion in structural biology 15(3): 285-9.
Association between Archaeal prolyl- and leucyl-tRNA synthetases enhances tRNA(Pro) aminoacylation.
Praetorius-Ibba M, Rogers TE, Samson R, Kelman Z, Ibba M. 2005. Association between Archaeal prolyl- and leucyl-tRNA synthetases enhances tRNA(Pro) aminoacylation. The Journal of biological chemistry 280(28): 26099-104.
Analysis of the structure and composition of individual lipoplex particles by flow fluorometry.
Pozharski EV, Macdonald RC. 2005. Analysis of the structure and composition of individual lipoplex particles by flow fluorometry. Analytical biochemistry 341(2): 230-40.