Publications

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Effects of gadolinium chelate on the evolution of the nanoscale structure in peptide hydrogels.
Taraban MB, Weerasekare M, Trewhella J, Shi X, Jeong EK, Yu YB. 2012. Effects of gadolinium chelate on the evolution of the nanoscale structure in peptide hydrogels. Biopolymers 98(1): 50-8. DOI: 10.1002/bip.21689
Reverse engineering to suggest biologically relevant redox activities of phenolic materials.
Kim E, Gordonov T, Liu Y, Bentley WE, Payne GF. 2013. Reverse engineering to suggest biologically relevant redox activities of phenolic materials. ACS chemical biology 8(4): 716-24. DOI: 10.1021/cb300605s
Further studies with isolated absolute infrared spectra of bacteriorhodopsin photocycle intermediates: conformational changes and possible role of a new proton-binding center.
Hendler RW, Meuse CW, Smith PD, Kakareka JW. 2013. Further studies with isolated absolute infrared spectra of bacteriorhodopsin photocycle intermediates: conformational changes and possible role of a new proton-binding center. Applied spectroscopy 67(1): 73-85. DOI: 10.1366/12-06662
Amplified and in situ detection of redox-active metabolite using a biobased redox capacitor.
Kim E, Gordonov T, Bentley WE, Payne GF. 2013. Amplified and in situ detection of redox-active metabolite using a biobased redox capacitor. Analytical chemistry 85(4): 2102-8. DOI: 10.1021/ac302703y
Biofabricated film with enzymatic and redox-capacitor functionalities to harvest and store electrons.
Liba BD, Kim E, Martin AN, Liu Y, Bentley WE, Payne GF. 2013. Biofabricated film with enzymatic and redox-capacitor functionalities to harvest and store electrons. Biofabrication 5(1): 015008. DOI: 10.1088/1758-5082/5/1/015008
Fusion pore formation and expansion induced by Ca2+ and synaptotagmin 1.
Lai Y, Diao J, Liu Y, Ishitsuka Y, Su Z, Schulten K, Ha T, Shin YK. 2013. Fusion pore formation and expansion induced by Ca2+ and synaptotagmin 1. Proceedings of the National Academy of Sciences of the United States of America 110(4): 1333-8. DOI: 10.1073/pnas.1218818110
In vivo screening of S100B inhibitors for melanoma therapy.
Zimmer DB, Lapidus RG, Weber DJ. 2013. In vivo screening of S100B inhibitors for melanoma therapy. Methods in molecular biology (Clifton, N.J.) 963: 303-17. DOI: 10.1007/978-1-62703-230-8_18
Quantifying the cluster of differentiation 4 receptor density on human T lymphocytes using multiple reaction monitoring mass spectrometry.
Wang M, He HJ, Turko IV, Phinney KW, Wang L. 2013. Quantifying the cluster of differentiation 4 receptor density on human T lymphocytes using multiple reaction monitoring mass spectrometry. Analytical chemistry 85(3): 1773-7. DOI: 10.1021/ac3031306
Molecular determinants of HIV-1 NCp7 chaperone activity in maturation of the HIV-1 dimerization initiation site.
Aduri R, Briggs KT, Gorelick RJ, Marino JP. 2013. Molecular determinants of HIV-1 NCp7 chaperone activity in maturation of the HIV-1 dimerization initiation site. Nucleic acids research 41(4): 2565-80. DOI: 10.1093/nar/gks1350
The archaeal DNA replication machinery: past, present and future.
Ishino S, Kelman LM, Kelman Z, Ishino Y. 2013. The archaeal DNA replication machinery: past, present and future. Genes & genetic systems 88(6): 315-9.
Identification and quantification of human DNA repair protein NEIL1 by liquid chromatography/isotope-dilution tandem mass spectrometry.
Reddy PT, Jaruga P, Kirkali G, Tuna G, Nelson BC, Dizdaroglu M. 2013. Identification and quantification of human DNA repair protein NEIL1 by liquid chromatography/isotope-dilution tandem mass spectrometry. Journal of proteome research 12(2): 1049-61. DOI: 10.1021/pr301037t
The modern "3G" age of archaeal molecular biology.
Robb FT, Lowe TM, Kelman Z. 2012. The modern "3G" age of archaeal molecular biology. Frontiers in microbiology 3: 430. DOI: 10.3389/fmicb.2012.00430
Structure-Based Discovery of a Novel Pentamidine-Related Inhibitor of the Calcium-Binding Protein S100B.
McKnight LE, Raman EP, Bezawada P, Kudrimoti S, Wilder PT, Hartman KG, Godoy-Ruiz R, Toth EA, Coop A, Mackerell AD, et al. 2012. Structure-Based Discovery of a Novel Pentamidine-Related Inhibitor of the Calcium-Binding Protein S100B. ACS medicinal chemistry letters 3(12): 975-979.
The evolution of S100B inhibitors for the treatment of malignant melanoma.
Hartman KG, McKnight LE, Liriano MA, Weber DJ. 2013. The evolution of S100B inhibitors for the treatment of malignant melanoma. Future medicinal chemistry 5(1): 97-109. DOI: 10.4155/fmc.12.191
Enhancing biocompatibility of D-oligopeptide hydrogels by negative charges.
Hyland LL, Twomey JD, Vogel S, Hsieh AH, Yu YB. 2013. Enhancing biocompatibility of D-oligopeptide hydrogels by negative charges. Biomacromolecules 14(2): 406-12. DOI: 10.1021/bm301598g